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Ubl3 Gene Detail
Summary
  • Symbol
    Ubl3
  • Name
    ubiquitin-like 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1344373
    NCBI Gene: 24109
  • Gene Overview
    MyGene.info: UBL3
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:148504635-148552789 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 88.66 cM, cytoband G2-3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    491 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1344373
protein coding gene Chr5:148504631-148552856 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030396
protein coding gene Chr5:154245893-154295793 (-)
A/J MGP_AJ_G0030369
protein coding gene Chr5:147667779-147715907 (-)
AKR/J MGP_AKRJ_G0030296
protein coding gene Chr5:152240497-152288630 (-)
BALB/cJ MGP_BALBcJ_G0030378
protein coding gene Chr5:148921182-148969253 (-)
C3H/HeJ MGP_C3HHeJ_G0030092
protein coding gene Chr5:153201668-153249789 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030833
protein coding gene Chr5:159924276-159972433 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028046
protein coding gene Chr5:142078333-142127318 (-)
CAST/EiJ MGP_CASTEiJ_G0029494
protein coding gene Chr5:152790662-152838742 (-)
CBA/J MGP_CBAJ_G0030070
protein coding gene Chr5:166602038-166656214 (-)
DBA/2J MGP_DBA2J_G0030214
protein coding gene Chr5:147356511-147405562 (-)
FVB/NJ MGP_FVBNJ_G0030168
protein coding gene Chr5:146575054-146622990 (-)
LP/J MGP_LPJ_G0030301
protein coding gene Chr5:154940858-154990864 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030204
protein coding gene Chr5:168800274-168853297 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030863
protein coding gene Chr5:152164299-152212440 (-)
PWK/PhJ MGP_PWKPhJ_G0029208
protein coding gene Chr5:146489572-146538475 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029044
protein coding gene Chr5:149463393-149511602 (-)
WSB/EiJ MGP_WSBEiJ_G0029571
protein coding gene Chr5:152973078-153021243 (-)



Homology
more
  • Human Ortholog
    UBL3, ubiquitin like 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    UBL3, ubiquitin like 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HCG-1, PNSC1
  • Links
    NCBI Gene ID: 5412
    neXtProt AC: NX_O95164
    UniProt: O95164

  • Chr Location
    13q12.3; chr13:29764408-29850683 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001687 Ensembl Gene Model | MGI Sequence Detail 48155 C57BL/6J ±  kb
transcript ENSMUST00000079324 Ensembl | MGI Sequence Detail 2537 Not Applicable  
polypeptide ENSMUSP00000078303 Ensembl | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    Genomic 1
    cDNA 13

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141152
References
more
  • Summaries
    All 30
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:56252 Chadwick BP, et al., Cloning, mapping and expression of UBL3, a novel ubiquitin-like gene. Gene. 1999 Jun 11;233(1-2):189-95
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory