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Rpl10a Gene Detail
Summary
  • Symbol
    Rpl10a
  • Name
    ribosomal protein L10A
  • Synonyms
    CsA-19, Nedd6
  • Feature Type
    protein coding gene
  • IDs
    MGI:1343877
    NCBI Gene: 19896
  • Gene Overview
    MyGene.info: RPL10A
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:28328471-28331032 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 14.65 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    12 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1343877
protein coding gene Chr17:28328471-28331033 (.)
129S1/SvImJ MGP_129S1SvImJ_G0023438
protein coding gene Chr17:27716985-27719667 (+)
A/J MGP_AJ_G0023396
protein coding gene Chr17:26809994-26812556 (+)
AKR/J MGP_AKRJ_G0023361
protein coding gene Chr17:27006402-27010850 (+)
BALB/cJ MGP_BALBcJ_G0023401
protein coding gene Chr17:27076922-27079522 (+)
C3H/HeJ MGP_C3HHeJ_G0023162
protein coding gene Chr17:27388372-27390961 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023843
protein coding gene Chr17:28835462-28839847 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021318
protein coding gene Chr17:24182433-24184860 (+)
CAST/EiJ MGP_CASTEiJ_G0022663
protein coding gene Chr17:27367702-27372330 (+)
CBA/J MGP_CBAJ_G0023136
protein coding gene Chr17:29861398-29867415 (+)
DBA/2J MGP_DBA2J_G0023267
protein coding gene Chr17:26364116-26366674 (+)
FVB/NJ MGP_FVBNJ_G0023237
protein coding gene Chr17:26172816-26175448 (+)
LP/J MGP_LPJ_G0023345
protein coding gene Chr17:27969919-27974258 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023255
protein coding gene Chr17:29297406-29305431 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023885
protein coding gene Chr17:27425988-27431531 (+)
PWK/PhJ MGP_PWKPhJ_G0022413
protein coding gene Chr17:25172284-25175125 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022231
protein coding gene Chr17:25434130-25437396 (+)
WSB/EiJ MGP_WSBEiJ_G0022725
protein coding gene Chr17:27425636-27429352 (+)



Homology
more
  • Human Ortholog
    RPL10A, ribosomal protein L10a
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RPL10A, ribosomal protein L10a
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Csa-19, CSA19, L10A, NEDD6
  • Links
    NCBI Gene ID: 4736
    neXtProt AC: NX_P62906
    UniProt: P62906

  • Chr Location
    6p21.31; chr6:35468401-35470781 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037805 Ensembl Gene Model | MGI Sequence Detail 2562 C57BL/6J ±  kb
transcript ENSMUST00000042334 Ensembl | MGI Sequence Detail 830 Not Applicable  
polypeptide ENSMUSP00000048469 Ensembl | MGI Sequence Detail 217 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR002143 Ribosomal protein L1
    IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich
    IPR023673 Ribosomal protein L1, conserved site
    IPR023674 Ribosomal protein L1-like
    IPR028364 Ribosomal protein L1/ribosomal biogenesis protein
Molecular
Reagents
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  • All nucleic 11
    cDNA 11

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-12812, MGI:97299
References
more
  • Summaries
    All 37
    Developmental Gene Expression 4
    Gene Ontology 8
    Phenotypes 9
  • Earliest
    J:1344 Kumar S, et al., Identification of a set of genes with developmentally down-regulated expression in the mouse brain. Biochem Biophys Res Commun. 1992 Jun 30;185(3):1155-61
  • Latest
    J:215826 Drane L, et al., A transgenic mouse line for collecting ribosome-bound mRNA using the tetracycline transactivator system. Front Mol Neurosci. 2014;7:82

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory