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Rbmxl1 Gene Detail
Summary
  • Symbol
    Rbmxl1
  • Name
    RNA binding motif protein, X-linked like-1
  • Synonyms
    hnRNP G, Hnrpg, Rbmxrt
  • Feature Type
    protein coding gene
  • IDs
    MGI:1343045
    NCBI Gene: 19656
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:79231898-79235527 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 37.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1343045
 protein coding gene Chr8:79231898-79235557 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033806
 protein coding gene Chr8:79130821-79134606 (-)
A/J MGP_AJ_G0033788
 protein coding gene Chr8:75966070-75970175 (-)
AKR/J MGP_AKRJ_G0033715
 protein coding gene Chr8:78250664-78255840 (-)
BALB/cJ MGP_BALBcJ_G0033782
 protein coding gene Chr8:76078226-76081883 (-)
C3H/HeJ MGP_C3HHeJ_G0033491
 protein coding gene Chr8:78862592-78867761 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034302
 protein coding gene Chr8:82146658-82151467 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031243
 protein coding gene Chr8:70062864-70066497 (-)
CAST/EiJ MGP_CASTEiJ_G0032822
 protein coding gene Chr8:78214945-78220217 (-)
CBA/J MGP_CBAJ_G0033470
 protein coding gene Chr8:85074756-85084289 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0033713
 protein coding gene Chr8:79200674-79206119 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0034319
 protein coding gene Chr8:78263590-78268136 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0032935
 protein coding gene Chr8:78594526-78599253 (-)



Homology
more
  • Human Ortholog
    RBMXL1, RBMX like 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RBMXL1, RBMX like 1
  • Synonyms
    RBM1
  • Links
    NCBI Gene ID: 494115
    neXtProt AC: NX_Q96E39
    UniProt: Q96E39

  • Chr Location
    1p22.2; chr1:88979456-88992960 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    19
  • Chemically induced (other)
    1
  • Gene trapped
    16
  • Targeted
    2
  • Genomic Mutations
    1 involving Rbmxl1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    30
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    728
  • Tissues
    22
  • cDNA Data
    134
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037070 Ensembl Gene Model | MGI Sequence Detail 3630 C57BL/6J ±  kb
transcript ENSMUST00000049245 Ensembl | MGI Sequence Detail 1695 Not Applicable  
polypeptide ENSMUSP00000048153 Ensembl | MGI Sequence Detail 388 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 135
    cDNA 134
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1201677
References
more
  • Summaries
    All 40
    Developmental Gene Expression 3
    Gene Ontology 7
    Phenotypes 9
  • Earliest
    J:45870 Delbridge ML, et al., Evolution of mammalian HNRPG and its relationship with the putative azoospermia factor RBM. Mamm Genome. 1998 Feb;9(2):168-70
  • Latest
    J:198500 Nakahara M, et al., Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm Genome. 2013 Jun;24(5-6):228-39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory