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Slc25a15
Gene Detail
Symbol

Name
ID
Slc25a15
solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
MGI:1342274
Synonyms
D630044L02Rik, Ornt1
Feature Type
protein coding gene
Genetic Map
Chromosome 8
11.26 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:22375554-22398621 bp, - strand
From Ensembl annotation of GRCm38

  23068 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6957  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: Slc25a15

Human
homologs
Human Homolog SLC25A15, solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
NCBI Gene ID 10166
neXtProt AC  NX_Q9Y619
Human Synonyms  D13S327, HHH, ORC1, ORNT1
Human Chr (Location)  13q14; chr13:40789411-40812460 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human SLC25A15
Mutations,
alleles, and
phenotypes
All mutations/alleles(10) : Gene trapped(7) Targeted(3)
Incidental mutations (data from APF )
Interactions
Slc25a15 interacts with 275 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process transport
Component integral component of membrane, membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (71)    Tissues (3)    Images (45)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 71
cDNA source data(52)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(53) cDNA(52) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene ModelENSMUSG00000031482 (Evidence)
Entrez Gene18408 (Evidence)
UniGene200907
DFCITC1579410, TC1596203, TC1651768
DoTSDT.101407426, DT.60105129
NIA Mouse Gene IndexU029634
Consensus CDS ProjectCCDS22175.1
International Mouse Knockout Project StatusSlc25a15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031482 Ensembl Gene Model | MGI Sequence Detail 23068 C57BL/6J ±  kb
transcript ENSMUST00000033871 Ensembl | MGI Sequence Detail 3451 Not Applicable 
polypeptide ENSMUSP00000033871 Ensembl | MGI Sequence Detail 301 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(64 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000015010 mitochondrial ornithine transporter 1
References
(Earliest) J:55475 Camacho JA, et al., Hyperornithinaemia-hyperammonaemia-homocitrullinuria syndrome is caused by mutations in a gene encoding a mitochondrial ornithine transporter. Nat Genet. 1999 Jun;22(2):151-8
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(32)
Other
accession IDs
MGI:2444400

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory