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Slc25a15
Gene Detail
Symbol

Name
ID
Slc25a15
solute carrier family 25 (mitochondrial carrier ornithine transporter), member 15
MGI:1342274
Synonyms
D630044L02Rik, Ornt1
Feature Type
protein coding gene
Genetic Map
Chromosome 8
11.26 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:22375554-22398621 bp, - strand
From Ensembl annotation of GRCm38

  23068 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6957  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: SLC25A15
Gene Tree: Slc25a15

Human
homologs
SLC25A15, solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 10166
neXtProt AC: NX_Q9Y619

Human Synonyms: D13S327, HHH, ORC1, ORNT1

Human Chr (Location): 13q14; chr13:40789411-40812460 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human SLC25A15

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(7) Targeted(4)
Incidental mutations (data from APF , CvDC )
Interactions
Slc25a15 interacts with 275 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process transport
Component integral component of membrane, membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (71)    Tissues (3)    Images (45)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 71
cDNA source data(52)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc25a15 ; ZFIN slc25a15b    NEW 
Molecular
reagents
All nucleic(53) cDNA(52) Primer pair(1)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000031482 (Evidence)
Entrez Gene 18408 (Evidence)
UniGene 200907
DFCI TC1651768, TC1596203, TC1579410
DoTS DT.60105129, DT.101407426
NIA Mouse Gene Index U029634
Consensus CDS Project CCDS22175.1
International Mouse Phenotyping Consortium Status Slc25a15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031482 Ensembl Gene Model | MGI Sequence Detail 23068 C57BL/6J ±  kb
transcript ENSMUST00000033871 Ensembl | MGI Sequence Detail 3451 Not Applicable 
polypeptide ENSMUSP00000033871 Ensembl | MGI Sequence Detail 301 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(4) UniProt(3)
Polymorphisms
SNPs within 2kb(64 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000015010 mitochondrial ornithine transporter 1
References
(Earliest) J:55475 Camacho JA, et al., Hyperornithinaemia-hyperammonaemia-homocitrullinuria syndrome is caused by mutations in a gene encoding a mitochondrial ornithine transporter. Nat Genet. 1999 Jun;22(2):151-8
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(32)
Other
accession IDs
MGI:2444400

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory