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Cdh22 Gene Detail
Summary
  • Symbol
    Cdh22
  • Name
    cadherin 22
  • Synonyms
    PB-cadherin
  • Feature Type
    protein coding gene
  • IDs
    MGI:1341843
    NCBI Gene: 104010
Location & Maps
more
  • Sequence Map
    Chr2:165111507-165234853 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      123347 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 85.43 cM
  • Detailed Genetic Map ± 1 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CDH22, cadherin 22
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CDH22, cadherin 22
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C20orf25, dJ998H6.1
  • Links
    NCBI Gene ID: 64405
    neXtProt AC: NX_Q9UJ99

  • Chr Location
    20q13.1; chr20:46173733-46308829 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001155 VEGA Gene Model | MGI Sequence Detail 123347 C57BL/6J ±  kb
transcript OTTMUST00000002249 VEGA | MGI Sequence Detail 3702 Not Applicable  
polypeptide OTTMUSP00000017847 VEGA | MGI Sequence Detail 813 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    819 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 20
    Genomic 1
    cDNA 16
    Primer pair 2
    Other 1

    Microarray probesets 2
References
more
  • Summaries
    All 37
    Developmental Gene Expression 11
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:56108 Kitajima K, et al., Expression of a novel type of classic cadherin, PB-cadherin in developing brain and limb buds. Dev Dyn. 1999 Jul;215(3):206-14
  • Latest
    J:214586 Duan X, et al., Type II cadherins guide assembly of a direction-selective retinal circuit. Cell. 2014 Aug 14;158(4):793-807

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/24/2016
MGI 6.04
The Jackson Laboratory