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S100a5
Gene Detail
 Symbol
Name
ID
S100a5
S100 calcium binding protein A5
MGI:1338915
Synonyms S100D9
Feature Type protein coding gene
Genetic Map
Chromosome 3
39.27 cM, cytoband F1-F2
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr3:90608523-90611780 bp, + strand
From VEGA annotation of GRCm38

  3258 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2224  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: S-100 protein
Gene Tree: S100a5

Human
homologs
Human Homolog S100A5, S100 calcium binding protein A5
NCBI Gene ID 6276
neXtProt AC  NX_P33763
Human Synonyms  S100D
Human Chr (Location)  1q21; chr1:153537147-153543296 (-)  GRCh38
Alleles
and
phenotypes
All alleles(5) : Targeted(4) Gene trapped(1)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process biological_process
Component neuronal cell body, nucleus
Function calcium ion binding, copper ion binding, ...
External Resources: FuncBase
Expression
cDNA source data(3)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(4) Genomic(1) cDNA(3)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000022120 (Evidence)
Ensembl Gene ModelENSMUSG00000001023 (Evidence)
Entrez Gene20199 (Evidence)
UniGene19946
DFCITC1593377
DoTSDT.40163793
Consensus CDS ProjectCCDS38505.1
International Mouse Knockout Project StatusS100a5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022120 VEGA Gene Model | MGI Sequence Detail 3258 C57BL/6J ±  kb
transcript OTTMUST00000052501 VEGA | MGI Sequence Detail 431 Not Applicable 
polypeptide OTTMUSP00000024904 VEGA | MGI Sequence Detail 93 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(10) UniProt(2)
Polymorphisms SNPs within 2kb(55 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018247 EF-Hand 1, calcium-binding site
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand-like domain
InterPro IPR013787 S100/CaBP-9k-type, calcium binding, subdomain
InterPro IPR001751 S100/Calbindin-D9k, conserved site
Protein Ontology PR:000014412 protein S100-A5
References (Earliest) J:52324 Ridinger K, et al., Clustered organization of S100 genes in human and mouse. Biochim Biophys Acta. 1998 Dec 10;1448(2):254-63
(Latest) J:173465 Tadenev AL, et al., Loss of Bardet-Biedl syndrome protein-8 (BBS8) perturbs olfactory function, protein localization, and axon targeting. Proc Natl Acad Sci U S A. 2011 Jun 21;108(25):10320-5
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory