S100a5
Gene Detail

Symbol Name ID

S100a5 S100 calcium binding protein A5 MGI:1338915

Synonyms

S100D9

Feature Type

protein coding gene

Genetic Map

Chromosome 3

39.27 cM, cytoband F1-F2
Detailed Genetic Map ± 1 cM


Mapping data(5)

Sequence Map

Chr3:90608523-90611780 bp, + strand From VEGA annotation of GRCm38   3258 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:2224  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: S-100 protein
Gene Tree: S100a5

Human homologs

Human Homolog		S100A5, S100 calcium binding protein A5
NCBI Gene ID		6276
neXtProt AC		NX_P33763
Human Synonyms		S100D
Human Chr (Location)		1q21; chr1:153509623-153514241 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(5) : Targeted(4) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	biological_process
Component	neuronal cell body, nucleus
Function	calcium ion binding, copper ion binding, ...

External Resources: FuncBase

Expression

cDNA source data(3)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(4) Genomic(1) cDNA(3)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000022120 (Evidence)
Ensembl Gene Model	ENSMUSG00000001023 (Evidence)
Entrez Gene	20199 (Evidence)
UniGene	19946
DFCI	TC1593377
DoTS	DT.40163793
Consensus CDS Project	CCDS38505.1
International Mouse Knockout Project Status	S100a5

Sequences

Length	Strain/Species
genomic	OTTMUSG00000022120	VEGA Gene Model | MGI Sequence Detail	3258	C57BL/6J
transcript	OTTMUST00000052501	VEGA | MGI Sequence Detail	431	Not Applicable
polypeptide	OTTMUSP00000024904	VEGA | MGI Sequence Detail	93	Not Applicable

All sequences(19) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(38 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR018247	EF-Hand 1, calcium-binding site
InterPro	IPR018249	EF-HAND 2
InterPro	IPR011992	EF-hand-like domain
InterPro	IPR013787	S100/CaBP-9k-type, calcium binding, subdomain
InterPro	IPR001751	S100/Calbindin-D9k, conserved site
Protein Ontology	PR:000014412	protein S100-A5

References

(Earliest) J:52324 Ridinger K, et al., Clustered organization of S100 genes in human and mouse. Biochim Biophys Acta. 1998 Dec 10;1448(2):254-63
(Latest) J:173465 Tadenev AL, et al., Loss of Bardet-Biedl syndrome protein-8 (BBS8) perturbs olfactory function, protein localization, and axon targeting. Proc Natl Acad Sci U S A. 2011 Jun 21;108(25):10320-5
All references(30)