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S100a5
Gene Detail
Symbol

Name
ID
S100a5
S100 calcium binding protein A5
MGI:1338915
Synonyms
S100D9
Feature Type
protein coding gene
Genetic Map
Chromosome 3
39.27 cM, cytoband F1-F2
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr3:90608523-90611780 bp, + strand
From VEGA annotation of GRCm38

  3258 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2224  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: S100A5
Protein SuperFamily: S-100 protein
Gene Tree: S100a5

Human
homologs
S100A5, S100 calcium binding protein A5
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 6276
neXtProt AC: NX_P33763

Human Synonyms: S100D

Human Chr (Location): 1q21; chr1:153537147-153542175 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(1) Targeted(6)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null allele are indistinguishable from wild-type littermates.
 
Interactions
S100a5 interacts with 26 markers (Mir30b, Mir30c-1, Mir30c-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process biological_process
Component neuronal cell body, nucleus
Function calcium ion binding, copper ion binding, ...
External Resources: FuncBase
Expression
cDNA source data(3)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(4) Genomic(1) cDNA(3)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000022120 (Evidence)
Ensembl Gene Model ENSMUSG00000001023 (Evidence)
Entrez Gene 20199 (Evidence)
UniGene 19946
DFCI TC1593377
DoTS DT.40163793
Consensus CDS Project CCDS38505.1
International Mouse Phenotyping Consortium Status S100a5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022120 VEGA Gene Model | MGI Sequence Detail 3258 C57BL/6J ±  kb
transcript OTTMUST00000052501 VEGA | MGI Sequence Detail 431 Not Applicable 
polypeptide OTTMUSP00000024904 VEGA | MGI Sequence Detail 93 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(8) UniProt(2)
Polymorphisms
SNPs within 2kb(55 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018247 EF-Hand 1, calcium-binding site
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand-like domain
InterPro IPR013787 S100/CaBP-9k-type, calcium binding, subdomain
InterPro IPR001751 S100/Calbindin-D9k, conserved site
Protein Ontology PR:000014412 protein S100-A5
References
(Earliest) J:52324 Ridinger K, et al., Clustered organization of S100 genes in human and mouse. Biochim Biophys Acta. 1998 Dec 10;1448(2):254-63
(Latest) J:215302 McClintock TS, et al., In vivo identification of eugenol-responsive and muscone-responsive mouse odorant receptors. J Neurosci. 2014 Nov 19;34(47):15669-78
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory