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S100a5 Gene Detail
Summary
  • Symbol
    S100a5
  • Name
    S100 calcium binding protein A5
  • Synonyms
    S100D9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1338915
    NCBI Gene: 20199
  • Gene Overview
    MyGene.info: S100A5
Location & Maps
more
  • Sequence Map
    Chr3:90608523-90611780 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3258 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 39.27 cM, cytoband F1-F2
  • Mapping Data
    5 experiments
Homology
more
  • Human Ortholog
    S100A5, S100 calcium binding protein A5
  • Vertebrate Orthologs
    7
  • Human Ortholog
    S100A5, S100 calcium binding protein A5
    Orthology source: HomoloGene
  • Synonyms
    S100D
  • Links
    NCBI Gene ID: 6276
    neXtProt AC: NX_P33763

  • Chr Location
    1q21; chr1:153537147-153542175 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    7 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    6
  • Genomic Mutations
    2 involving S100a5
  • Incidental Mutations
Mice homozygous for a null allele are indistinguishable from wild-type littermates.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022120 VEGA Gene Model | MGI Sequence Detail 3258 C57BL/6J ±  kb
transcript OTTMUST00000052501 VEGA | MGI Sequence Detail 431 Not Applicable  
polypeptide OTTMUSP00000024904 VEGA | MGI Sequence Detail 93 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    64 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 3
References
more
  • Summaries
    All 27
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:52324 Ridinger K, et al., Clustered organization of S100 genes in human and mouse. Biochim Biophys Acta. 1998 Dec 10;1448(2):254-63
  • Latest
    J:215302 McClintock TS, et al., In vivo identification of eugenol-responsive and muscone-responsive mouse odorant receptors. J Neurosci. 2014 Nov 19;34(47):15669-78

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory