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S100a5 Gene Detail
Summary
  • Symbol
    S100a5
  • Name
    S100 calcium binding protein A5
  • Synonyms
    S100D9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1338915
    NCBI Gene: 20199
  • Gene Overview
    MyGene.info: S100A5
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:90608523-90611780 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 39.27 cM, cytoband F1-F2
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1338915
protein coding gene Chr3:90606479-90611784 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027476
protein coding gene Chr3:90941517-90944772 (+)
A/J MGP_AJ_G0027440
protein coding gene Chr3:87905108-87908421 (+)
AKR/J MGP_AKRJ_G0027405
protein coding gene Chr3:90071139-90074394 (+)
BALB/cJ MGP_BALBcJ_G0027449
protein coding gene Chr3:87862167-87865418 (+)
C3H/HeJ MGP_C3HHeJ_G0027191
protein coding gene Chr3:90232871-90236110 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027895
protein coding gene Chr3:94345091-94348344 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025248
protein coding gene Chr3:83407171-83410424 (+)
CAST/EiJ MGP_CASTEiJ_G0026637
protein coding gene Chr3:90630159-90633388 (+)
CBA/J MGP_CBAJ_G0027166
protein coding gene Chr3:97551437-97554692 (+)
DBA/2J MGP_DBA2J_G0027303
protein coding gene Chr3:87270448-87273687 (+)
FVB/NJ MGP_FVBNJ_G0027271
protein coding gene Chr3:85600859-85604116 (+)
LP/J MGP_LPJ_G0027412
protein coding gene Chr3:91997474-92000731 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027292
protein coding gene Chr3:103794332-103797583 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027954
protein coding gene Chr3:89818677-89821918 (+)
PWK/PhJ MGP_PWKPhJ_G0026371
protein coding gene Chr3:87170014-87173261 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026191
protein coding gene Chr3:88999440-89002687 (+)
WSB/EiJ MGP_WSBEiJ_G0026719
protein coding gene Chr3:90224558-90227783 (+)



Homology
more
  • Human Ortholog
    S100A5, S100 calcium binding protein A5
  • Vertebrate Orthologs
    7
  • Human Ortholog
    S100A5, S100 calcium binding protein A5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    S100D
  • Links
    NCBI Gene ID: 6276
    neXtProt AC: NX_P33763
    UniProt: P33763

  • Chr Location
    1q21.3; chr1:153537114-153543514 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    7 phenotype references
Mice homozygous for a null allele are indistinguishable from wild-type littermates.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001023 Ensembl Gene Model | MGI Sequence Detail 3258 C57BL/6J ±  kb
transcript ENSMUST00000107329 Ensembl | MGI Sequence Detail 431 Not Applicable  
polypeptide ENSMUSP00000102952 Ensembl | MGI Sequence Detail 93 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    Genomic 1
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 31
    Diseases 1
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:52324 Ridinger K, et al., Clustered organization of S100 genes in human and mouse. Biochim Biophys Acta. 1998 Dec 10;1448(2):254-63
  • Latest
    J:215302 McClintock TS, et al., In vivo identification of eugenol-responsive and muscone-responsive mouse odorant receptors. J Neurosci. 2014 Nov 19;34(47):15669-78

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory