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S100a3
Gene Detail
Symbol

Name
ID
S100a3
S100 calcium binding protein A3
MGI:1338849
Synonyms
S100E
Feature Type
protein coding gene
Genetic Map
Chromosome 3
39.26 cM, cytoband F1-F2
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr3:90600215-90602702 bp, + strand
From Ensembl annotation of GRCm38

  2488 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2223  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog

HCOP human homology predictions: S100A3
Protein SuperFamily: S-100 protein
Gene Tree: S100a3

Human
homologs
S100A3, S100 calcium binding protein A3
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 6274
neXtProt AC: NX_P33764

Human Synonyms: S100E

Human Chr (Location): 1q21; chr1:153547333-153549258 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
S100a3 interacts with 33 markers (Mir22, Mir30c-2, Mir92-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Component cytoplasm, nucleolus
Function calcium ion binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (5)    Tissues (1)    Images (5)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 5
cDNA source data(65)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(66) Genomic(1) cDNA(65)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000001021 (Evidence)
Entrez Gene 20197 (Evidence)
UniGene 440044
DFCI TC1581703
DoTS DT.91294192, DT.111057044, DT.536917
NIA Mouse Gene Index U163064
Consensus CDS Project CCDS17537.1
International Mouse Phenotyping Consortium Status S100a3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000001021 Ensembl Gene Model | MGI Sequence Detail 2488 C57BL/6J ±  kb
transcript ENSMUST00000001047 Ensembl | MGI Sequence Detail 712 Not Applicable 
polypeptide ENSMUSP00000001047 Ensembl | MGI Sequence Detail 101 Not Applicable 

For the selected sequences
All sequences(39) RefSeq(18) UniProt(2)
Polymorphisms
SNPs within 2kb(45 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011992 EF-hand-like domain
InterPro IPR013787 S100/CaBP-9k-type, calcium binding, subdomain
InterPro IPR001751 S100/Calbindin-D9k, conserved site
Protein Ontology PR:000014410 protein S100-A3
References
(Earliest) J:50719 Kizawa K, et al., Gene expression of mouse S100A3, a cysteine-rich calcium-binding protein, in developing hair follicle. J Invest Dermatol. 1998 Nov;111(5):879-86
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory