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Pex16
Gene Detail
Symbol

Name
ID
Pex16
peroxisomal biogenesis factor 16
MGI:1338829
Synonyms
peroxisome biogenesis factor 16
Feature Type
protein coding gene
Genetic Map
Chromosome 2
50.98 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:92374676-92381217 bp, + strand
From VEGA annotation of GRCm38

  6542 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3537  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Pex16

Human
homologs
Human Homolog PEX16, peroxisomal biogenesis factor 16
NCBI Gene ID 9409
neXtProt AC  NX_Q9Y5Y5
Human Synonyms  PBD8A, PBD8B
Human Chr (Location)  11p11.2; chr11:45909669-45918123 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human PEX16
Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(2) Targeted(5)
Genomic Mutations involving Pex16 (2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pex16 interacts with 32 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000014473 (Evidence)
Ensembl Gene ModelENSMUSG00000027222 (Evidence)
Entrez Gene18633 (Evidence)
DFCITC1662287, TC1757520, TC1579327
DoTSDT.491480, DT.97412399, DT.55236524
NIA Mouse Gene IndexU002138
Consensus CDS ProjectCCDS16444.1
International Mouse Knockout Project StatusPex16
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014473 VEGA Gene Model | MGI Sequence Detail 6542 C57BL/6J ±  kb
transcript OTTMUST00000034356 VEGA | MGI Sequence Detail 1392 Not Applicable 
polypeptide OTTMUSP00000015393 VEGA | MGI Sequence Detail 336 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(7) UniProt(3)
Polymorphisms
SNPs within 2kb(62 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013919 Peroxisome membrane protein, Pex16
Protein Ontology PR:000012561 peroxisomal membrane protein PEX16
References
(Earliest) J:52366 South ST, et al., Peroxisome synthesis in the absence of preexisting peroxisomes. J Cell Biol. 1999 Jan 25;144(2):255-66
(Latest) J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory