Pex16
Gene Detail

Symbol Name ID

Pex16 peroxisomal biogenesis factor 16 MGI:1338829

Synonyms

peroxisome biogenesis factor 16

Feature Type

protein coding gene

Genetic Map

Chromosome 2

50.98 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr2:92374676-92381217 bp, + strand From VEGA annotation of GRCm38   6542 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:3537  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Pex16

Human homologs

Human Homolog		PEX16, peroxisomal biogenesis factor 16
NCBI Gene ID		9409
neXtProt AC		NX_Q9Y5Y5
Human Synonyms		PBD8A, PBD8B
Human Chr (Location)		11p11.2; chr11:45931220-45939674 (-)  GRCh37.p10
Disease Associations		(3) Diseases Associated with Human PEX16

Alleles and phenotypes

All alleles(5) : Targeted(3) Gene trapped(2)

Gene Ontology (GO) classifications

All GO classifications: (18 annotations)

Process	ER-dependent peroxisome organization, peroxisome membrane biogenesis, ...
Component	endoplasmic reticulum, endoplasmic reticulum membrane, ...
Function	protein C-terminus binding

This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase

Expression

cDNA source data(7)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(8) cDNA(8)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000014473 (Evidence)
Ensembl Gene Model	ENSMUSG00000027222 (Evidence)
Entrez Gene	18633 (Evidence)
DFCI	TC1579327, TC1662287, TC1757520
DoTS	DT.491480, DT.55236524, DT.97412399
NIA Mouse Gene Index	U002138
Consensus CDS Project	CCDS16444.1
International Mouse Knockout Project Status	Pex16

Sequences

Length	Strain/Species
genomic	OTTMUSG00000014473	VEGA Gene Model | MGI Sequence Detail	6542	C57BL/6J
transcript	OTTMUST00000034356	VEGA | MGI Sequence Detail	1392	Not Applicable
polypeptide	OTTMUSP00000015393	VEGA | MGI Sequence Detail	336	Not Applicable

All sequences(36) RefSeq(3) UniProt(2)

Polymorphisms

SNPs within 2kb(62 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR013919	Peroxisome membrane protein, Pex16
Protein Ontology	PR:000012561	peroxisomal membrane protein PEX16

References

(Earliest) J:52366 South ST, et al., Peroxisome synthesis in the absence of preexisting peroxisomes. J Cell Biol. 1999 Jan 25;144(2):255-66
(Latest) J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
All references(33)