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Pex16
Gene Detail
Symbol

Name
ID
Pex16
peroxisomal biogenesis factor 16
MGI:1338829
Synonyms
peroxisome biogenesis factor 16
Feature Type
protein coding gene
Genetic Map
Chromosome 2
50.98 cM, cytoband E1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:92374676-92381217 bp, + strand
From VEGA annotation of GRCm38

  6542 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3537  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: PEX16
Gene Tree: Pex16

Human
homologs
PEX16, peroxisomal biogenesis factor 16
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 9409
neXtProt AC: NX_Q9Y5Y5

Human Synonyms: PBD8A, PBD8B

Human Chr (Location): 11p11.2; chr11:45909669-45918123 (-)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human PEX16

Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(2) Targeted(5)
Genomic Mutations involving Pex16 (2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pex16 interacts with 31 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase pex16 ; ZFIN pex16    NEW 
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000014473 (Evidence)
Ensembl Gene Model ENSMUSG00000027222 (Evidence)
Entrez Gene 18633 (Evidence)
DFCI TC1579327, TC1662287, TC1757520
DoTS DT.491480, DT.55236524, DT.97412399
NIA Mouse Gene Index U002138
Consensus CDS Project CCDS16444.1
International Mouse Phenotyping Consortium Status Pex16
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014473 VEGA Gene Model | MGI Sequence Detail 6542 C57BL/6J ±  kb
transcript OTTMUST00000034356 VEGA | MGI Sequence Detail 1392 Not Applicable 
polypeptide OTTMUSP00000015393 VEGA | MGI Sequence Detail 336 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(7) UniProt(2)
Polymorphisms
SNPs within 2kb(62 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013919 Peroxisome membrane protein, Pex16
Protein Ontology PR:000012561 peroxisomal membrane protein PEX16
References
(Earliest) J:52366 South ST, et al., Peroxisome synthesis in the absence of preexisting peroxisomes. J Cell Biol. 1999 Jan 25;144(2):255-66
(Latest) J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory