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Agpat3
Gene Detail
Symbol

Name
ID
Agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3
MGI:1336186
Synonyms
D10Jhu12e, LPAAT3
Feature Type
protein coding gene
Genetic Map
Chromosome 10
39.72 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr10:78269178-78352489 bp, - strand
From VEGA annotation of GRCm38

  83312 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10591  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like protein
Gene Tree: Agpat3

Human
homologs
Human Homolog AGPAT3, 1-acylglycerol-3-phosphate O-acyltransferase 3
NCBI Gene ID 56894
neXtProt AC  NX_Q9NRZ7
Human Synonyms  LPAAT3, LPAAT-GAMMA1
Human Chr (Location)  21q22.3; chr21:43865149-43987594 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(12) Targeted(5)
Genomic Mutations involving Agpat3 (3)
Incidental mutations (data from Mutagenetix , APF )
Alleles Annotated to Human Diseases(1)   
Interactions
Agpat3 interacts with 339 markers (Mir7-2, Mir7b, Mir9-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (7 records)
Data Summary: Results (195)    Tissues (159)    Images (31)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 177
RT-PCR 18
cDNA source data(11)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(25) Genomic(8) cDNA(14) Primer pair(2) Other(1)
Microarray probesets(8)
Other database
links
VEGA Gene ModelOTTMUSG00000020522 (Evidence)
Ensembl Gene ModelENSMUSG00000001211 (Evidence)
Entrez Gene28169 (Evidence)
DFCITC1575083, TC1608769
DoTSDT.101391274, DT.101391277, DT.522213, DT.530677, DT.99841351
NIA Mouse Gene IndexU031971
EC2.3.1.51
Consensus CDS ProjectCCDS23963.1
International Mouse Knockout Project StatusAgpat3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020522 VEGA Gene Model | MGI Sequence Detail 83312 C57BL/6J ±  kb
transcript OTTMUST00000048657 VEGA | MGI Sequence Detail 5980 Not Applicable 
polypeptide OTTMUSP00000022361 VEGA | MGI Sequence Detail 376 Not Applicable 

For the selected sequences
All sequences(112) RefSeq(22) UniProt(7)
Polymorphisms
SNPs within 2kb(128 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002123 Phospholipid/glycerol acyltransferase
Protein Ontology PR:000003836 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
References
(Earliest) J:53813 Cole SE, et al., High-resolution comparative physical mapping of mouse chromosome 10 in the region of homology with human chromosome 21. Mamm Genome. 1999 Mar;10(3):229-34
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(51)
Other
accession IDs
MGI:2143803, MGI:2143842

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory