About   Help   FAQ
Agpat3
Gene Detail
Symbol

Name
ID
Agpat3
1-acylglycerol-3-phosphate O-acyltransferase 3
MGI:1336186
Synonyms
D10Jhu12e, LPAAT3
Feature Type
protein coding gene
Genetic Map
Chromosome 10
39.72 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr10:78269178-78352489 bp, - strand
From VEGA annotation of GRCm38

  83312 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:10591  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: AGPAT3
Protein SuperFamily: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like protein
Gene Tree: Agpat3

Human
homologs
AGPAT3, 1-acylglycerol-3-phosphate O-acyltransferase 3
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 56894
neXtProt AC: NX_Q9NRZ7

Human Synonyms: LPAAT3, LPAAT-GAMMA1

Human Chr (Location): 21q22.3; chr21:43865160-43987594 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(17) : Gene trapped(12) Targeted(5)
Genomic Mutations involving Agpat3 (3)
Incidental mutations (data from Mutagenetix , APF )
Mutations Annotated to Human Diseases (1)   
Interactions
Agpat3 interacts with 339 markers (Mir7-2, Mir7b, Mir9-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (7 records)
Data Summary: Results (195)    Tissues (159)    Images (31)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 177
RT-PCR 18
cDNA source data(11)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: GEISHA AGPAT3 ; Xenbase agpat3 ; ZFIN agpat3    NEW 
Molecular
reagents
All nucleic(25) Genomic(8) cDNA(14) Primer pair(2) Other(1)
Microarray probesets(8)
Other database
links
VEGA Gene Model OTTMUSG00000020522 (Evidence)
Ensembl Gene Model ENSMUSG00000001211 (Evidence)
Entrez Gene 28169 (Evidence)
DFCI TC1608769, TC1575083
DoTS DT.530677, DT.99841351, DT.101391277, DT.101391274, DT.522213
NIA Mouse Gene Index U031971
EC 2.3.1.51
Consensus CDS Project CCDS23963.1
International Mouse Phenotyping Consortium Status Agpat3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020522 VEGA Gene Model | MGI Sequence Detail 83312 C57BL/6J ±  kb
transcript OTTMUST00000048657 VEGA | MGI Sequence Detail 5980 Not Applicable 
polypeptide OTTMUSP00000022361 VEGA | MGI Sequence Detail 376 Not Applicable 

For the selected sequences
All sequences(109) RefSeq(18) UniProt(6)
Polymorphisms
SNPs within 2kb(128 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002123 Phospholipid/glycerol acyltransferase
Protein Ontology PR:000003836 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
References
(Earliest) J:53813 Cole SE, et al., High-resolution comparative physical mapping of mouse chromosome 10 in the region of homology with human chromosome 21. Mamm Genome. 1999 Mar;10(3):229-34
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(49)
Other
accession IDs
MGI:2143803, MGI:2143842

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/20/2015
MGI 5.22
The Jackson Laboratory