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Pex19 Gene Detail
Summary
  • Symbol
    Pex19
  • Name
    peroxisomal biogenesis factor 19
  • Synonyms
    peroxisome biogenesis factor 19, Pxf
  • Feature Type
    protein coding gene
  • IDs
    MGI:1334458
    NCBI Gene: 19298
  • Gene Overview
    MyGene.info: PEX19
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:172126755-172136493 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 79.54 cM
  • Mapping Data
    7 experiments
Strain
Comparison
more
  • SNPs within 2kb
    94 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1334458
protein coding gene Chr1:172126743-172136497 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016778
protein coding gene Chr1:177976998-177990255 (+)
A/J MGP_AJ_G0016757
protein coding gene Chr1:170694532-170704312 (+)
AKR/J MGP_AKRJ_G0016723
protein coding gene Chr1:175853868-175863521 (+)
BALB/cJ MGP_BALBcJ_G0016718
protein coding gene Chr1:171241099-171251170 (+)
C3H/HeJ MGP_C3HHeJ_G0016542
protein coding gene Chr1:176426724-176437470 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017180
protein coding gene Chr1:183884742-183894465 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014886
protein coding gene Chr1:162401421-162410956 (+)
CAST/EiJ MGP_CASTEiJ_G0016122
protein coding gene Chr1:175787624-175797914 (+)
CBA/J MGP_CBAJ_G0016516
protein coding gene Chr1:190429968-190443025 (+)
DBA/2J MGP_DBA2J_G0016623
protein coding gene Chr1:169633461-169643364 (+)
FVB/NJ MGP_FVBNJ_G0016620
protein coding gene Chr1:167885284-167894958 (+)
LP/J MGP_LPJ_G0016694
protein coding gene Chr1:179066608-179080695 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016647
protein coding gene Chr1:197685553-197696222 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017216
protein coding gene Chr1:175719337-175729811 (+)
PWK/PhJ MGP_PWKPhJ_G0015908
protein coding gene Chr1:169005205-169016049 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015690
protein coding gene Chr1:174662659-174677663 (+)
WSB/EiJ MGP_WSBEiJ_G0016184
protein coding gene Chr1:175871600-175882924 (+)



Homology
more
  • Human Ortholog
    PEX19, peroxisomal biogenesis factor 19
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PEX19, peroxisomal biogenesis factor 19
    Orthology source: HomoloGene, HGNC
  • Synonyms
    D1S2223E, HK33, PBD12A, PMP1, PMPI, PXF, PXMP1
  • Links
    NCBI Gene ID: 5824
    neXtProt AC: NX_P40855
    UniProt: P40855

  • Chr Location
    1q23.2; chr1:160276809-160285151 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000003464 Ensembl Gene Model | MGI Sequence Detail 9739 C57BL/6J ±  kb
transcript ENSMUST00000075895 Ensembl | MGI Sequence Detail 1917 Not Applicable  
polypeptide ENSMUSP00000075289 Ensembl | MGI Sequence Detail 299 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 172
    Genomic 19
    cDNA 151
    Primer pair 2

    Microarray probesets 7
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 6
  • Earliest
    J:52606 Eddleston J, et al., Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp). Genomics. 1999 Mar 1;56(2):149-59
  • Latest
    J:184126 Kashiwayama Y, et al., 70-kDa peroxisomal membrane protein related protein (P70R/ABCD4) localizes to endoplasmic reticulum not peroxisomes, and NH2-terminal hydrophobic property determines the subcellular localization of ABC subfamily D proteins. Exp Cell Res. 2009 Jan 15;315(2):190-205

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory