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Rbpms Gene Detail
Summary
  • Symbol
    Rbpms
  • Name
    RNA binding protein gene with multiple splicing
  • Synonyms
    2010300K22Rik, 2700019M19Rik, hermes
  • Feature Type
    protein coding gene
  • IDs
    MGI:1334446
    NCBI Gene: 19663
  • Gene Overview
    MyGene.info: RBPMS
  • Alliance
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:33782643-33929863 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 20.85 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1845 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1334446
protein coding gene Chr8:33782643-33929896 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033529
protein coding gene Chr8:32249283-32412104 (-)
A/J MGP_AJ_G0033509
protein coding gene Chr8:31013441-31163711 (-)
AKR/J MGP_AKRJ_G0033433
protein coding gene Chr8:31983354-32138800 (-)
BALB/cJ MGP_BALBcJ_G0033505
protein coding gene Chr8:31133976-31284178 (-)
C3H/HeJ MGP_C3HHeJ_G0033217
protein coding gene Chr8:32307121-32462155 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034021
protein coding gene Chr8:33485951-33639438 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030970
protein coding gene Chr8:28015971-28167336 (-)
CAST/EiJ MGP_CASTEiJ_G0032544
protein coding gene Chr8:31747899-31903759 (-)
CBA/J MGP_CBAJ_G0033195
protein coding gene Chr8:34800175-34970576 (-)
DBA/2J MGP_DBA2J_G0033348
protein coding gene Chr8:30992082-31142507 (-)
FVB/NJ MGP_FVBNJ_G0033293
protein coding gene Chr8:30654181-30801428 (-)
LP/J MGP_LPJ_G0033438
protein coding gene Chr8:32216218-32379365 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033335
protein coding gene Chr8:34327952-34489833 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034040
protein coding gene Chr8:32071858-32223593 (-)
PWK/PhJ MGP_PWKPhJ_G0032256
protein coding gene Chr8:30506855-30657633 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032087
protein coding gene Chr8:31338266-31491866 (-)
WSB/EiJ MGP_WSBEiJ_G0032660
protein coding gene Chr8:32208090-32374668 (-)



Homology
more
  • Human Ortholog
    RBPMS, RNA binding protein, mRNA processing factor
  • Vertebrate Orthologs
    8
  • Human Ortholog
    RBPMS, RNA binding protein, mRNA processing factor
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HERMES
  • Links
    NCBI Gene ID: 11030
    neXtProt AC: NX_Q93062
    UniProt: Q93062

  • Chr Location
    8p12; chr8:30384501-30572261 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031586 Ensembl Gene Model | MGI Sequence Detail 147221 C57BL/6J ±  kb
transcript ENSMUST00000033995 Ensembl | MGI Sequence Detail 1039 Not Applicable  
polypeptide ENSMUSP00000033995 Ensembl | MGI Sequence Detail 220 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    8 Sequences
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
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  • All nucleic 106
    cDNA 103
    Primer pair 2
    Other 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1913726, MGI:1914439, MGI:2142682
References
more
  • Summaries
    All 53
    Developmental Gene Expression 16
    Gene Ontology 5
    Phenotypes 10
  • Earliest
    J:52530 Gerber WV, et al., The RNA-binding protein gene, hermes, is expressed at high levels in the developing heart. Mech Dev. 1999 Jan;80(1):77-86
  • Latest
    J:263841 Gu L, et al., Downregulation of splicing regulator RBFOX1 compromises visual depth perception. PLoS One. 2018;13(7):e0200417

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory