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Ppp1r17
Gene Detail
Symbol

Name
ID
Ppp1r17
protein phosphatase 1, regulatory subunit 17
MGI:1333876
Synonyms
Gsbs, G-substrate
Feature Type
protein coding gene
Genetic Map
Chromosome 6
27.65 cM, cytoband C1
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:56017515-56032688 bp, + strand
From NCBI annotation of GRCm38

  15174 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4849  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

Protein SuperFamily: G-substrate
Gene Tree: Ppp1r17

Human
homologs
Human Homolog PPP1R17, protein phosphatase 1, regulatory subunit 17
NCBI Gene ID 10842
neXtProt AC  NX_O96001
Human Synonyms  C7orf16, GSBS
Human Chr (Location)  7p15; chr7:31687017-31708455 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human PPP1R17
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
 
Mice homozygous for a knock-out allele exhibit normal retina.
 
Interactions
Ppp1r17 interacts with 148 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (70)    Tissues (12)    Images (44)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 66
Northern blot 1
RT-PCR 3
cDNA source data(11)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) cDNA(11) Primer pair(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000002930 (Evidence)
Entrez Gene19051 (Evidence)
UniGene42096
DFCITC1584827
DoTSDT.97354565
NIA Mouse Gene IndexU006911
Consensus CDS ProjectCCDS20169.1
International Mouse Knockout Project StatusPpp1r17
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 19051 NCBI Gene Model | MGI Sequence Detail 15174 C57BL/6J ±  kb
transcript NM_011153 RefSeq | MGI Sequence Detail 1738 C57BL/6 
polypeptide Q9Z2E4 UniProt | EBI | MGI Sequence Detail 159 Not Applicable 

For the selected sequences
All sequences(16) RefSeq(2) UniProt(2)
Polymorphisms
RFLP(1) : SNPs within 2kb(183 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000008277 protein phosphatase 1 regulatory subunit 17
Graphical View of Protein Domain Structure
References
(Earliest) J:38063 Sowden JC, et al., The identification of novel sequences expressed in the mouse notochord. Mamm Genome. 1997 Jan;8(1):42-4
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory