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Hs3st3a1 Gene Detail
Summary
  • Symbol
    Hs3st3a1
  • Name
    heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
  • Synonyms
    3Ost3a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1333861
    NCBI Gene: 15478
  • Gene Overview
    MyGene.info: HS3ST3A1
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:64435332-64522835 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 40.24 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    502 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1333861
protein coding gene Chr11:64435332-64522841 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018472
protein coding gene Chr11:64601512-64694049 (+)
A/J MGP_AJ_G0018441
protein coding gene Chr11:62204461-62290479 (+)
AKR/J MGP_AKRJ_G0018410
protein coding gene Chr11:64105741-64194274 (+)
BALB/cJ MGP_BALBcJ_G0018412
protein coding gene Chr11:62458085-62542896 (+)
C3H/HeJ MGP_C3HHeJ_G0018225
protein coding gene Chr11:64058887-64146595 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018864
protein coding gene Chr11:66573471-66670214 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016508
protein coding gene Chr11:59229941-59316674 (+)
CAST/EiJ MGP_CASTEiJ_G0017781
protein coding gene Chr11:64265242-64368086 (+)
CBA/J MGP_CBAJ_G0018199
protein coding gene Chr11:69474689-69574772 (+)
DBA/2J MGP_DBA2J_G0018308
protein coding gene Chr11:61742432-61831102 (+)
FVB/NJ MGP_FVBNJ_G0018298
protein coding gene Chr11:61394105-61482643 (+)
LP/J MGP_LPJ_G0018380
protein coding gene Chr11:65132254-65230435 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018322
protein coding gene Chr11:70394757-70490569 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018905
protein coding gene Chr11:64261827-64350764 (+)
PWK/PhJ MGP_PWKPhJ_G0017555
protein coding gene Chr11:62360000-62448648 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017345
protein coding gene Chr11:64134405-64230145 (+)
WSB/EiJ MGP_WSBEiJ_G0017834
protein coding gene Chr11:63888603-63981376 (+)



Homology
more
  • Human Ortholog
    HS3ST3A1, heparan sulfate-glucosamine 3-sulfotransferase 3A1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    HS3ST3A1, heparan sulfate-glucosamine 3-sulfotransferase 3A1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    3-OST-3A, 3OST3A1
  • Links
    NCBI Gene ID: 9955
    neXtProt AC: NX_Q9Y663
    UniProt: Q9Y663

  • Chr Location
    17p12; chr17:13494032-13601942 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    1
  • Genomic Mutations
    1 involving Hs3st3a1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 15478 NCBI Gene Model | MGI Sequence Detail 87504 C57BL/6J ±  kb
transcript NM_178870 RefSeq | MGI Sequence Detail 3933 C57BL/6  
polypeptide Q8BKN6 UniProt | EBI | MGI Sequence Detail 393 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 7
References
more
  • Summaries
    All 30
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:243411 Rutledge EA, et al., Cellular heterogeneity in the ureteric progenitor niche and distinct profiles of branching morphogenesis in organ development. Development. 2017 Sep 01;144(17):3177-3188

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory