About   Help   FAQ
Olfr54 Gene Detail
Summary
  • Symbol
    Olfr54
  • Name
    olfactory receptor 54
  • Synonyms
    F3, GA_x6K02T2QP88-4411197-4410256, MOR126-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1333750
    NCBI Gene: 18354
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr11:51027004-51027945 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 30.97 cM, cytoband B1.3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    60 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1333750
protein coding gene Chr11:51014236-51031578 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018263
protein coding gene Chr11:50252125-50253066 (+)
A/J MGP_AJ_G0018231
protein coding gene Chr11:48326175-48327116 (+)
AKR/J MGP_AKRJ_G0018202
protein coding gene Chr11:49850141-49850966 (+)
BALB/cJ MGP_BALBcJ_G0018201
protein coding gene Chr11:48599388-48600329 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0018652
protein coding gene Chr11:51713929-51714870 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0017576
protein coding gene Chr11:49846109-49847885 (+)
CBA/J MGP_CBAJ_G0017989
protein coding gene Chr11:54158904-54159845 (+)
DBA/2J MGP_DBA2J_G0018096
protein coding gene Chr11:48092106-48093047 (+)
FVB/NJ MGP_FVBNJ_G0018090
protein coding gene Chr11:47737018-47745357 (+)
LP/J MGP_LPJ_G0018171
protein coding gene Chr11:50625954-50626895 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0017353
protein coding gene Chr11:48494001-48501771 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 18354 NCBI Gene Model | MGI Sequence Detail 942 C57BL/6J ±  kb
transcript NM_010997 RefSeq | MGI Sequence Detail 942 Not Specified  
polypeptide NP_035127 RefSeq | MGI Sequence Detail 313 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 6
    cDNA 5
    Other 1

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/13/2019
MGI 6.14
The Jackson Laboratory