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Slc33a1
Gene Detail
 Symbol
Name
ID
Slc33a1
solute carrier family 33 (acetyl-CoA transporter), member 1
MGI:1332247
Synonyms Acatn, D630022N01Rik
Feature Type protein coding gene
Genetic Map
Chromosome 3
30.08 cM, cytoband E1-E3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr3:63933507-63964768 bp, - strand
From VEGA annotation of GRCm38

  31262 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:3476  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Slc33a1

Human
homologs
Human Homolog SLC33A1, solute carrier family 33 (acetyl-CoA transporter), member 1
NCBI Gene ID 9197
neXtProt AC  NX_O00400
Human Synonyms  ACATN, AT1, AT-1, CCHLND, SPG42
Human Chr (Location)  3q25.31; chr3:155826511-155854459 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human SLC33A1
Alleles
and
phenotypes
All alleles(2) : Targeted(2)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process transport
Component endoplasmic reticulum, integral component of membrane, ...
Function acetyl-CoA transporter activity
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (22)    Tissues (22)    Images (3)
Theiler Stages: 22, 23, 24, 26, 28
Assay TypeResults
RNA in situ 22
cDNA source data(84)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress
Molecular
reagents
All nucleic(84) cDNA(84)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000026586 (Evidence)
Ensembl Gene ModelENSMUSG00000027822 (Evidence)
Entrez Gene11416 (Evidence)
UniGene135619
DFCITC1574254, TC1599453
DoTSDT.101249590, DT.101388765, DT.490215
NIA Mouse Gene IndexU024110, U247977
Consensus CDS ProjectCCDS17382.1
International Mouse Knockout Project StatusSlc33a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026586 VEGA Gene Model | MGI Sequence Detail 31262 C57BL/6J ±  kb
transcript OTTMUST00000065779 VEGA | MGI Sequence Detail 1978 Not Applicable 
polypeptide OTTMUSP00000032828 VEGA | MGI Sequence Detail 550 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(72 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR024371 Acetyl-coenzyme A transporter 1
InterPro IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1
InterPro IPR016196 Major facilitator superfamily domain, general substrate transporter
Protein Ontology PR:000015085 acetyl-coenzyme A transporter 1
References (Earliest) J:53140 Bora RS, et al., Assignment1 of a putative acetyl-CoA transporter gene (Acatn) to mouse chromosome band 3E1-E3 by in situ hybridization. Cytogenet Cell Genet. 1998;83(1-2):78-9
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)
Other
accession IDs
MGI:2139668, MGI:2139794, MGI:2442761

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory