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Igkv6-20 Gene Detail
Summary
  • Symbol
    Igkv6-20
  • Name
    immunoglobulin kappa variable 6-20
  • Feature Type
    gene segment
  • IDs
    MGI:1330836
    NCBI Gene: 108024
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:70335841-70336479 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 31.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1330836
gene segment Chr6:70335841-70336507 (-)
129S1/SvImJ MGP_129S1SvImJ_G0000168
gene segment Chr6:70486120-70486768 (-)
A/J MGP_AJ_G0000149
gene segment Chr6:67702714-67703380 (-)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0000171
gene segment Chr6:70345647-70346313 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0000128
gene segment Chr4:49418502-49419150 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0000107
gene segment Chr6:68450671-68451323 (-)
WSB/EiJ MGP_WSBEiJ_G0000147
gene segment Chr6:69888196-69888848 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 108024 NCBI Gene Model | MGI Sequence Detail 639 C57BL/6J ±  kb
transcript L41881 GenBank | EMBL | DDBJ | MGI Sequence Detail 384 BALB/c  
polypeptide A0A140T8P2 UniProt | EBI | MGI Sequence Detail 115 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Gene Ontology 1
  • Earliest
    J:30573 Asakura K, et al., Oligodendrocyte-reactive O1, O4, and HNK-1 monoclonal antibodies are encoded by germline immunoglobulin genes. Brain Res Mol Brain Res. 1995 Dec 28;34(2):283-93
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory