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Krtap6-1 Gene Detail
Summary
  • Symbol
    Krtap6-1
  • Name
    keratin associated protein 6-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1330228
    NCBI Gene: 16700
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:88828587-88829180 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 51.42 cM, cytoband C3.3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1330228
protein coding gene Chr16:88828587-88829180 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023007
protein coding gene Chr16:89857225-89857812 (+)
A/J MGP_AJ_G0022975
protein coding gene Chr16:85690196-85690789 (+)
AKR/J MGP_AKRJ_G0022945
protein coding gene Chr16:88305459-88306046 (+)
BALB/cJ MGP_BALBcJ_G0022977
protein coding gene Chr16:86225049-86225642 (+)
C3H/HeJ MGP_C3HHeJ_G0022738
protein coding gene Chr16:88860853-88861440 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023424
protein coding gene Chr16:92750756-92751352 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020928
protein coding gene Chr16:83495460-83496006 (+)
CAST/EiJ MGP_CASTEiJ_G0022258
protein coding gene Chr16:89314517-89315021 (+)
CBA/J MGP_CBAJ_G0022707
protein coding gene Chr16:96704184-96704771 (+)
DBA/2J MGP_DBA2J_G0022841
protein coding gene Chr16:85624523-85625110 (+)
FVB/NJ MGP_FVBNJ_G0022816
protein coding gene Chr16:84720050-84720643 (+)
LP/J MGP_LPJ_G0022911
protein coding gene Chr16:89545835-89546422 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022836
protein coding gene Chr16:101307533-101308126 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023442
protein coding gene Chr16:88792000-88792571 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0021834
protein coding gene Chr16:88353065-88353658 (+)
WSB/EiJ MGP_WSBEiJ_G0022309
protein coding gene Chr16:89032442-89033388 (+)



Homology
more
  • Human Ortholog
    KRTAP6-3, keratin associated protein 6-3
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP6-3, keratin associated protein 6-3
  • Synonyms
    KAP6.3
  • Links
    NCBI Gene ID: 337968
    UniProt: Q3LI67

  • Chr Location
    21q22.11; chr21:30592440-30593055 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 16700 NCBI Gene Model | MGI Sequence Detail 594 C57BL/6J ±  kb
transcript NM_010672 RefSeq | MGI Sequence Detail 594 C57BL/6  
polypeptide NP_034802 RefSeq | MGI Sequence Detail 78 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR040313 Keratin-associated protein 6
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 4
References
more
  • Summaries
    All 24
    Phenotypes 5
  • Earliest
    J:44334 Aoki N, et al., Isolation and characterization of mouse high-glycine/tyrosine proteins. J Biol Chem. 1997 Nov 28;272(48):30512-8
  • Latest
    J:262380 Watson-Scales S, et al., Analysis of motor dysfunction in Down Syndrome reveals motor neuron degeneration. PLoS Genet. 2018 May;14(5):e1007383

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/14/2022
MGI 6.19
The Jackson Laboratory