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Rex2
Gene Detail
Symbol

Name
ID
Rex2
reduced expression 2
MGI:1328322
Synonyms
Gm13138
Feature Type
protein coding gene
Genetic Map
Chromosome 4
78.42 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:147021850-147060794 bp, + strand
From VEGA annotation of GRCm38

  38945 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:133076  Vertebrate Homology Class
1 human; 13 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle

Gene Tree: Rex2

Human
homologs
Human Homolog ZNF616, zinc finger protein 616
NCBI Gene ID 90317
neXtProt AC  NX_Q08AN1
Human Chr (Location)  19q13.41; chr19:52113091-52139938 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(11) Targeted(3)
Interactions
Rex2 interacts with 241 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process regulation of transcription, DNA-templated
Component nucleus
Function sequence-specific DNA binding transcription factor activity
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (38)    Tissues (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 2
RT-PCR 36
cDNA source data(6)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(6) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000010655 (Evidence)
Ensembl Gene ModelENSMUSG00000067919 (Evidence)
Entrez Gene100043034 (Evidence)
Consensus CDS ProjectCCDS51374.1
International Mouse Knockout Project StatusRex2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010655 VEGA Gene Model | MGI Sequence Detail 38945 C57BL/6J ±  kb
transcript OTTMUST00000024876 VEGA | MGI Sequence Detail 3993 Not Applicable 
polypeptide OTTMUSP00000011412 VEGA | MGI Sequence Detail 685 Not Applicable 

For the selected sequences
All sequences(25) RefSeq(4) UniProt(6)
Polymorphisms
SNPs within 2kb(299 from dbSNP Build 137)    SNPs within 2kb including multiple locations(837)
Protein-related
information
ResourceIDDescription
InterPro IPR001909 Krueppel-associated box
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
References
(Earliest) J:50125 Faria TN, et al., Characterization of genes which exhibit reduced expression during the retinoic acid-induced differentiation of F9 teratocarcinoma cells: involvement of cyclin D3 in RA-mediated growth arrest. Mol Cell Endocrinol. 1998 Aug 25;143(1-2):155-66
(Latest) J:198500 Nakahara M, et al., Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm Genome. 2013 Jun;24(5-6):228-39
All references(31)
Other
accession IDs
MGI:3801715

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory