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Bex1
Gene Detail
Symbol

Name
ID
Bex1
brain expressed gene 1
MGI:1328321
Synonyms
Rex3
Feature Type
protein coding gene
Genetic Map
Chromosome X
57.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:136213972-136215513 bp, - strand
From VEGA annotation of GRCm38

  1542 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:137218  Vertebrate Homology Class
1 mouse; 1 rhesus macaque; 1 dog

Protein SuperFamily: brain-expressed X-linked protein
Gene Tree: Bex1

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(4) Targeted(1)
Incidental mutations (data from APF )
 
Mice homozygous for a gene trapped allele display impaired exercise performance and abnormal muscle regeneration.
 
Interactions
Bex1 interacts with 31 markers (Mir22, Mir133a-1, Mir133a-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process cell differentiation, multicellular organismal development, ...
Component cytoplasm, nucleus
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (9 records)
Data Summary: Results (160)    Tissues (29)    Images (24)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 99
Northern blot 19
RT-PCR 42
cDNA source data(55)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(59) cDNA(55) Primer pair(4)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000018673 (Evidence)
Ensembl Gene ModelENSMUSG00000050071 (Evidence)
Entrez Gene19716 (Evidence)
UniGene422943
DoTSDT.537641, DT.99864131
Consensus CDS ProjectCCDS30417.1
International Mouse Knockout Project StatusBex1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000018673 VEGA Gene Model | MGI Sequence Detail 1542 C57BL/6J ±  kb
transcript OTTMUST00000044945 VEGA | MGI Sequence Detail 866 Not Applicable 
polypeptide OTTMUSP00000020195 VEGA | MGI Sequence Detail 128 Not Applicable 

For the selected sequences
All sequences(35) RefSeq(2) UniProt(1)
Polymorphisms
PCR(1) : SNPs within 2kb(22 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007623 Brain-expressed X-linked protein
InterPro IPR021156 Transcription elongation factor A-like/Brain expressed X-linked-like
Protein Ontology PR:000004728 protein BEX1
References
(Earliest) J:50125 Faria TN, et al., Characterization of genes which exhibit reduced expression during the retinoic acid-induced differentiation of F9 teratocarcinoma cells: involvement of cyclin D3 in RA-mediated growth arrest. Mol Cell Endocrinol. 1998 Aug 25;143(1-2):155-66
(Latest) J:174767 Tang F, et al., Deterministic and stochastic allele specific gene expression in single mouse blastomeres. PLoS One. 2011;6(6):e21208
All references(41)
Other
accession IDs
MGI:2147819, MGI:2147956

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory