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Zc3h7b Gene Detail
Summary
  • Symbol
    Zc3h7b
  • Name
    zinc finger CCCH type containing 7B
  • Synonyms
    Scrg3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1328310
    NCBI Gene: 20286
  • Gene Overview
    MyGene.info: ZC3H7B
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:81745057-81796260 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 38.23 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    324 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1328310
protein coding gene Chr15:81744848-81796269 (.)
129S1/SvImJ MGP_129S1SvImJ_G0022119
protein coding gene Chr15:82203571-82257476 (+)
A/J MGP_AJ_G0022080
protein coding gene Chr15:79301115-79359438 (+)
AKR/J MGP_AKRJ_G0022055
protein coding gene Chr15:81497813-81551274 (+)
BALB/cJ MGP_BALBcJ_G0022086
protein coding gene Chr15:79345698-79398471 (+)
C3H/HeJ MGP_C3HHeJ_G0021857
protein coding gene Chr15:81516103-81572268 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022529
protein coding gene Chr15:85432510-85495015 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020058
protein coding gene Chr15:75757972-75806555 (+)
CAST/EiJ MGP_CASTEiJ_G0021377
protein coding gene Chr15:82285296-82340427 (+)
CBA/J MGP_CBAJ_G0021821
protein coding gene Chr15:88087613-88147875 (+)
DBA/2J MGP_DBA2J_G0021951
protein coding gene Chr15:78779232-78830318 (+)
FVB/NJ MGP_FVBNJ_G0021928
protein coding gene Chr15:77818126-77870262 (+)
LP/J MGP_LPJ_G0022019
protein coding gene Chr15:82352532-82408189 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021949
protein coding gene Chr15:93032719-93093044 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022543
protein coding gene Chr15:81592080-81647291 (+)
PWK/PhJ MGP_PWKPhJ_G0021119
protein coding gene Chr15:78817780-78870902 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020956
protein coding gene Chr15:81385411-81436881 (+)
WSB/EiJ MGP_WSBEiJ_G0021429
protein coding gene Chr15:82010000-82062181 (+)



Homology
more
  • Human Ortholog
    ZC3H7B, zinc finger CCCH-type containing 7B
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ZC3H7B, zinc finger CCCH-type containing 7B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RoXaN
  • Links
    NCBI Gene ID: 23264
    neXtProt AC: NX_Q9UGR2
    UniProt: Q9UGR2

  • Chr Location
    22q13.2; chr22:41301503-41360147 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    26 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000022390 Ensembl Gene Model | MGI Sequence Detail 51204 C57BL/6J ±  kb
transcript ENSMUST00000109554 Ensembl | MGI Sequence Detail 5740 Not Applicable  
polypeptide ENSMUSP00000105181 Ensembl | MGI Sequence Detail 982 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
    IPR036236 Zinc finger C2H2 superfamily
    IPR000571 Zinc finger, CCCH-type
    IPR036855 Zinc finger, CCCH-type superfamily
Molecular
Reagents
less
  • All nucleic 121
    Genomic 2
    cDNA 119

    Microarray probesets 4
Other
Accession IDs
less
MGI:2685473
References
more
  • Summaries
    All 48
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 26
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory