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Vmn2r42
Gene Detail
 Symbol
Name
ID
Vmn2r42
vomeronasal 2, receptor 42
MGI:1316666
Synonyms V2r4
Feature Type protein coding gene
Genetic Map
Chromosome 7
5.80 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:8183265-8200320 bp, - strand
From VEGA annotation of GRCm38

  17056 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:113703  Vertebrate Homology Class
24 mouse; 3 rat

Protein SuperFamily: metabotropic glutamate receptor-like protein
Gene Tree: Vmn2r42

Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Vmn2r42 interacts with 259 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process G-protein coupled receptor signaling pathway, signal transduction
Component integral component of membrane, membrane, ...
Function G-protein coupled receptor activity, signal transducer activity
External Resources: FuncBase
Expression
cDNA source data(1)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(1) Other(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000042465 (Evidence)
Ensembl Gene ModelENSMUSG00000070844 (Evidence)
Entrez Gene22310 (Evidence)
UniGene359403
DoTSDT.111005749
Consensus CDS ProjectCCDS57483.1
International Mouse Knockout Project StatusVmn2r42
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000042465 VEGA Gene Model | MGI Sequence Detail 17056 C57BL/6J ±  kb
transcript OTTMUST00000111966 VEGA | MGI Sequence Detail 3623 Not Applicable 
polypeptide OTTMUSP00000062825 VEGA | MGI Sequence Detail 852 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(2) UniProt(3)
Polymorphisms RFLP(1) : SNPs within 2kb(138 from dbSNP Build 137)    SNPs within 2kb including multiple locations(442)
Protein-related
information
ResourceIDDescription
InterPro IPR001828 Extracellular ligand-binding receptor
InterPro IPR000337 GPCR, family 3
InterPro IPR017978 GPCR, family 3, C-terminal
InterPro IPR011500 GPCR, family 3, nine cysteines domain
InterPro IPR004073 GPCR, family 3, vomeronasal receptor, type 2
References (Earliest) J:42391 Matsunami H, et al., A multigene family encoding a diverse array of putative pheromone receptors in mammals. Cell. 1997 Aug 22;90(4):775-84
(Latest) J:125082 Young JM, et al., V2R gene families degenerated in primates, dog and cow, but expanded in opossum. Trends Genet. 2007 May;23(5):212-5
All references(14)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory