Usp9y
Gene Detail

Symbol Name ID

Usp9y ubiquitin specific peptidase 9, Y chromosome MGI:1313274

Synonyms

Dffry, Fafl2

Feature Type

protein coding gene

Genetic Map

Chromosome Y
cytoband p

Mapping data(3)

Sequence Map

ChrY:1298957-1459782 bp, - strand From VEGA annotation of GRCm38   160826 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:68408  Vertebrate Homology Class
1 human; 1 mouse; 1 cattle

Gene Tree: Usp9y

Human homologs

Human Homolog		USP9Y, ubiquitin specific peptidase 9, Y-linked
NCBI Gene ID		8287
neXtProt AC		NX_O00507
Human Synonyms		DFFRY, SPGFY2
Human Chr (Location)		Yq11.2; chrY:14813160-14972768 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human USP9Y

Alleles and phenotypes

All alleles(2) : Targeted(2)

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	proteolysis
Component	cellular_component
Function	cysteine-type peptidase activity, hydrolase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (39)    Tissues (16)   
Theiler Stages: 21, 25, 26, 28

Assay Type	Results
RT-PCR	39

cDNA source data(1)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(6) Genomic(3) cDNA(1) Primer pair(2)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000026255 (Evidence)
Ensembl Gene Model	ENSMUSG00000069044 (Evidence)
Entrez Gene	107868 (Evidence)
UniGene	347376
DoTS	DT.94269773
EC	3.4.19.12
Consensus CDS Project	CCDS30544.1
International Mouse Knockout Project Status	Usp9y

Sequences

Length	Strain/Species
genomic	OTTMUSG00000026255	VEGA Gene Model | MGI Sequence Detail	160826	C57BL/6J
transcript	OTTMUST00000064932	VEGA | MGI Sequence Detail	8098	Not Applicable
polypeptide	OTTMUSP00000032293	VEGA | MGI Sequence Detail	2556	Not Applicable

All sequences(14) RefSeq(2) UniProt(2)

Polymorphisms

RFLP(1) : SNPs(100 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR016024	Armadillo-type fold
InterPro	IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
InterPro	IPR018200	Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site

References

(Earliest) J:45388 Brown GM, et al., Characterisation of the coding sequence and fine mapping of the human DFFRY gene and comparative expression analysis and mapping to the Sxrb interval of the mouse Y chromosome of the Dffry gene. Hum Mol Genet. 1998 Jan;7(1):97-107
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(22)