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Usp9y Gene Detail
Summary
  • Symbol
    Usp9y
  • Name
    ubiquitin specific peptidase 9, Y chromosome
  • Synonyms
    Dffry, Fafl2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1313274
    NCBI Gene: 107868
  • Gene Overview
    MyGene.info: USP9Y
Location & Maps
more
  • Sequence Map
    ChrY:1298961-1459782 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      160822 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome Y, cytoband p
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    USP9Y, ubiquitin specific peptidase 9, Y-linked
  • Vertebrate Orthologs
    3
  • Human Ortholog
    USP9Y, ubiquitin specific peptidase 9, Y-linked
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DFFRY, SPGFY2
  • Links
    NCBI Gene ID: 8287
    neXtProt AC: NX_O00507

  • Chr Location
    Yq11.2; chrY:12701231-12860844 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human USP9Y associations

Human Disease Mouse Models
       Spermatogenic Failure, Y-Linked, 2; SPGFY2   OMIM: 415000
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Other Mouse Links
  • Other Vertebrate Links
    ZFIN usp9
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026255 VEGA Gene Model | MGI Sequence Detail 160822 C57BL/6J ±  kb
transcript OTTMUST00000064932 VEGA | MGI Sequence Detail 8094 Not Applicable  
polypeptide OTTMUSP00000032293 VEGA | MGI Sequence Detail 2556 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    138 from dbSNP Build 142
  • RFLP
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR016024 Armadillo-type fold
    IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase
    IPR018200 Ubiquitin specific protease, conserved site
    IPR028889 Ubiquitin specific protease domain
Molecular
Reagents
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  • All nucleic 6
    Genomic 3
    cDNA 1
    Primer pair 2

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Developmental Gene Expression 4
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:45388 Brown GM, et al., Characterisation of the coding sequence and fine mapping of the human DFFRY gene and comparative expression analysis and mapping to the Sxrb interval of the mouse Y chromosome of the Dffry gene. Hum Mol Genet. 1998 Jan;7(1):97-107
  • Latest
    J:204287 Stegeman S, et al., Loss of Usp9x disrupts cortical architecture, hippocampal development and TGFbeta-mediated axonogenesis. PLoS One. 2013;8(7):e68287

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory