About   Help   FAQ
Olfr39 Gene Detail
Summary
  • Symbol
    Olfr39
  • Name
    olfactory receptor 39
  • Synonyms
    GA_x6K02T2PVTD-14025733-14026668, MOR144-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1313142
    NCBI Gene: 258822
  • Gene Overview
    MyGene.info: OR7D4
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:20282351-20286648 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 7.51 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    17
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1313142
protein coding gene Chr9:20282351-20287578 (.)
129S1/SvImJ MGP_129S1SvImJ_G0034414
protein coding gene Chr9:17405440-17412210 (+)
A/J MGP_AJ_G0034392
protein coding gene Chr9:17164567-17168864 (+)
AKR/J MGP_AKRJ_G0034319
protein coding gene Chr9:17455007-17459681 (+)
BALB/cJ MGP_BALBcJ_G0034383
protein coding gene Chr9:17053478-17057743 (+)
C3H/HeJ MGP_C3HHeJ_G0034095
protein coding gene Chr9:17770026-17774323 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034904
protein coding gene Chr9:18148525-18152810 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0033418
protein coding gene Chr9:17586165-17596955 (+)
CBA/J MGP_CBAJ_G0034068
protein coding gene Chr9:18830106-18836610 (+)
DBA/2J MGP_DBA2J_G0034227
protein coding gene Chr9:17135856-17140113 (+)
FVB/NJ MGP_FVBNJ_G0034170
protein coding gene Chr9:16657410-16663290 (+)
LP/J MGP_LPJ_G0034312
protein coding gene Chr9:17592024-17596134 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034213
protein coding gene Chr9:20464560-20477755 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034924
protein coding gene Chr9:17413826-17418123 (+)
PWK/PhJ MGP_PWKPhJ_G0033124
protein coding gene Chr9:17141935-17146527 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032958
protein coding gene Chr9:17473912-17478190 (+)
WSB/EiJ MGP_WSBEiJ_G0033533
protein coding gene Chr9:17149128-17153902 (+)



Homology
more
  • Human Ortholog
    OR7D4, olfactory receptor family 7 subfamily D member 4
  • Vertebrate Orthologs
    7
  • Human Ortholog
    OR7D4, olfactory receptor family 7 subfamily D member 4
    Orthology source: HomoloGene
  • Synonyms
    hg105, OR19-7, OR19B, OR19-B, OR7D4P
  • Links
    NCBI Gene ID: 125958
    neXtProt AC: NX_Q8NG98
    UniProt: Q8NG98

  • Chr Location
    19p13.2; chr19:9213850-9214871 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258822 NCBI Gene Model | MGI Sequence Detail 4298 C57BL/6J ±  kb
transcript NM_146825 RefSeq | MGI Sequence Detail 1098 C57BL/6  
polypeptide NP_667036 RefSeq | MGI Sequence Detail 319 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    cDNA 1
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Developmental Gene Expression 1
    Gene Ontology 3
  • Earliest
    J:44485 Carver EA, et al., Location of mouse and human genes corresponding to conserved canine olfactory receptor gene subfamilies. Mamm Genome. 1998 May;9(5):349-54
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory