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Amd-ps1 Pseudogene Detail
Summary
  • Symbol
    Amd-ps1
  • Name
    S-adenosylmethionine decarboxylase, pseudogene 1
  • Synonyms
    AMD3
  • Feature Type
    pseudogene
  • IDs
    MGI:1310005
    NCBI Gene: 11701
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:153938191-153939184 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 72.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1310005
pseudogene ChrX:153937867-153941046 (+)
129S1/SvImJ MGP_129S1SvImJ_G0014123
pseudogene Chr9:22218819-22219812 (-)
A/J MGP_AJ_G0014937
pseudogene ChrX:152320587-152322241 (+)
AKR/J MGP_AKRJ_G0014878
pseudogene ChrX:157132742-157133864 (+)
BALB/cJ MGP_BALBcJ_G0011433
pseudogene Chr18:61868190-61869626 (-)
C3H/HeJ MGP_C3HHeJ_G0014729
pseudogene ChrX:153369890-153372683 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012944
pseudogene Chr4:51581206-51582762 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0014336
pseudogene ChrX:132505157-132506157 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0014798
pseudogene ChrX:151329152-151330116 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0014072
pseudogene Chr9:22405479-22406472 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0012948
pseudogene Chr4:49426971-49427951 (-)
PWK/PhJ MGP_PWKPhJ_G0013397
pseudogene Chr9:21684364-21685344 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013181
pseudogene Chr9:22194942-22195934 (-)
WSB/EiJ MGP_WSBEiJ_G0013638
pseudogene Chr9:21876951-21877944 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083823 Ensembl Gene Model | MGI Sequence Detail 994 C57BL/6J ±  kb
transcript ENSMUST00000120127 Ensembl | MGI Sequence Detail 994 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Genomic 1
Other
Accession IDs
less
MGI:1202721
References
more
  • Summaries
    All 5
  • Earliest
    J:48430 Nishimura K, et al., Structure and activity of mouse S-adenosylmethionine decarboxylase gene promoters and properties of the encoded proteins. Biochem J. 1998 Jun 15;332(Pt 3):651-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/22/2022
MGI 6.22
The Jackson Laboratory