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Rps17
Gene Detail
Symbol

Name
ID
Rps17
ribosomal protein S17
MGI:1309526
Feature Type
protein coding gene
Genetic Map
Chromosome 7
45.71 cM, cytoband D2
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:81342732-81345254 bp, - strand
From VEGA annotation of GRCm38

  2523 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:110867  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: RPS17
Protein SuperFamily: ribosomal protein S17
Gene Tree: Rps17

Human
homologs
RPS17, ribosomal protein S17
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 6218
neXtProt AC: NX_P08708, NX_P0CW22

Human Synonyms: DBA4, RPS17L, RPS17L1, RPS17L2, S17

Human Chr (Location): 15q; chr15:82536750-82540544 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human RPS17

Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(13) Targeted(1)
Interactions
Rps17 interacts with 2 markers (Mir325, Mir674)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (8 records)
Data Summary: Results (3)    Tissues (3)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 3
cDNA source data(10)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase rps17 ; ZFIN rps17    NEW 
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000022965 (Evidence)
Ensembl Gene Model ENSMUSG00000061787 (Evidence)
Entrez Gene 20068 (Evidence)
Consensus CDS Project CCDS40006.1
International Mouse Phenotyping Consortium Status Rps17
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022965 VEGA Gene Model | MGI Sequence Detail 2523 C57BL/6J ±  kb
transcript OTTMUST00000055265 VEGA | MGI Sequence Detail 494 Not Applicable 
polypeptide OTTMUSP00000026442 VEGA | MGI Sequence Detail 135 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(15 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001210 Ribosomal protein S17e
InterPro IPR018273 Ribosomal protein S17e, conserved site
Protein Ontology PR:000014259 40S ribosomal protein S17
References
(Earliest) J:1572 Varmuza S, et al., Isolation of epiblast-specific cDNA clones by differential hybridization with polymerase chain reaction-amplified probes derived from single embryos. Mol Reprod Dev. 1992 Aug;32(4):339-48
(Latest) J:199588 Luo XJ, et al., GATA3 controls the specification of prosensory domain and neuronal survival in the mouse cochlea. Hum Mol Genet. 2013 Sep 15;22(18):3609-23
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory