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Rps17
Gene Detail
 Symbol
Name
ID
Rps17
ribosomal protein S17
MGI:1309526
Feature Type protein coding gene
Genetic Map
Chromosome 7
45.71 cM, cytoband D2
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:81342732-81345254 bp, - strand
From VEGA annotation of GRCm38

  2523 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:110867  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: ribosomal protein S17
Gene Tree: Rps17

Human
homologs
Human Homolog RPS17, ribosomal protein S17
NCBI Gene ID 6218
neXtProt AC  NX_P08708, NX_P0CW22
Human Synonyms  DBA4, RPS17L, RPS17L1, RPS17L2, S17
Human Chr (Location)  15q; chr15:82536753-82540457 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RPS17
Mutations,
alleles, and
phenotypes
All mutations/alleles(14) : Gene trapped(13) Targeted(1)
Interactions
Rps17 interacts with 2 markers (Mir325, Mir674)
Gene Ontology
(GO)
classifications
All GO classifications: (18 annotations)
Process erythrocyte homeostasis, ribosomal small subunit assembly, ...
Component cytosolic small ribosomal subunit, extracellular vesicular exosome, ...
Function poly(A) RNA binding, structural constituent of ribosome
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (8 records)
Data Summary: Results (3)    Tissues (3)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 3
cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000022965 (Evidence)
Ensembl Gene ModelENSMUSG00000061787 (Evidence)
Entrez Gene20068 (Evidence)
Consensus CDS ProjectCCDS40006.1
International Mouse Knockout Project StatusRps17
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022965 VEGA Gene Model | MGI Sequence Detail 2523 C57BL/6J ±  kb
transcript OTTMUST00000055265 VEGA | MGI Sequence Detail 494 Not Applicable 
polypeptide OTTMUSP00000026442 VEGA | MGI Sequence Detail 135 Not Applicable 

For the selected sequences
All sequences(34) RefSeq(2) UniProt(4)
Polymorphisms SNPs within 2kb(15 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001210 Ribosomal protein S17e
InterPro IPR018273 Ribosomal protein S17e, conserved site
Protein Ontology PR:000014259 40S ribosomal protein S17
References (Earliest) J:1572 Varmuza S, et al., Isolation of epiblast-specific cDNA clones by differential hybridization with polymerase chain reaction-amplified probes derived from single embryos. Mol Reprod Dev. 1992 Aug;32(4):339-48
(Latest) J:199588 Luo XJ, et al., GATA3 controls the specification of prosensory domain and neuronal survival in the mouse cochlea. Hum Mol Genet. 2013 Sep 15;22(18):3609-23
All references(33)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory