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Hspa13 Gene Detail
Summary
  • Symbol
    Hspa13
  • Name
    heat shock protein 70 family, member 13
  • Synonyms
    1600002I10Rik, 60kDa, B230217N24Rik, Stch
  • Feature Type
    protein coding gene
  • IDs
    MGI:1309463
    NCBI Gene: 110920
  • Gene Overview
    MyGene.info: HSPA13
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:75755190-75767277 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 43.36 cM, cytoband C3.2
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    126 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1309463
protein coding gene Chr16:75755190-75767277 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022954
protein coding gene Chr16:75772476-75784098 (-)
A/J MGP_AJ_G0022922
protein coding gene Chr16:72436247-72448078 (-)
AKR/J MGP_AKRJ_G0022892
protein coding gene Chr16:74660545-74672176 (-)
BALB/cJ MGP_BALBcJ_G0022924
protein coding gene Chr16:72832963-72844594 (-)
C3H/HeJ MGP_C3HHeJ_G0022686
protein coding gene Chr16:75098269-75109900 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023372
protein coding gene Chr16:78219431-78231062 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020875
protein coding gene Chr16:71000810-71012576 (-)
CAST/EiJ MGP_CASTEiJ_G0022209
protein coding gene Chr16:75500029-75511683 (-)
CBA/J MGP_CBAJ_G0022656
protein coding gene Chr16:81552971-81564602 (-)
DBA/2J MGP_DBA2J_G0022789
protein coding gene Chr16:72276681-72288322 (-)
FVB/NJ MGP_FVBNJ_G0022764
protein coding gene Chr16:71668623-71680254 (-)
LP/J MGP_LPJ_G0022859
protein coding gene Chr16:75569139-75580761 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022782
protein coding gene Chr16:84649163-84661685 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023389
protein coding gene Chr16:74980732-74992375 (-)
PWK/PhJ MGP_PWKPhJ_G0021951
protein coding gene Chr16:72533951-72546049 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021781
protein coding gene Chr16:74615228-74627871 (-)
WSB/EiJ MGP_WSBEiJ_G0022256
protein coding gene Chr16:75159489-75171120 (-)



Homology
more
  • Human Ortholog
    HSPA13, heat shock protein family A (Hsp70) member 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    HSPA13, heat shock protein family A (Hsp70) member 13
    Orthology source: HomoloGene, HGNC
  • Synonyms
    STCH
  • Links
    NCBI Gene ID: 6782
    neXtProt AC: NX_P48723
    UniProt: P48723

  • Chr Location
    21q11.2; chr21:14371115-14383188 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 110920 NCBI Gene Model | MGI Sequence Detail 12088 C57BL/6J ±  kb
transcript NR_027492 RefSeq | MGI Sequence Detail 4175 C57BL/6  
polypeptide Q8BM72 UniProt | EBI | MGI Sequence Detail 471 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    Genomic 1
    cDNA 17
    Primer pair 1

    Microarray probesets 8
Other
Accession IDs
less
MGI:1917025, MGI:1926096, MGI:2146589
References
more
  • Summaries
    All 44
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 3
    Phenotypes 12
  • Earliest
    J:47556 Reeves RH, et al., Stch maps to mouse chromosome 16, extending the conserved synteny with human chromosome 21. Genomics. 1998 Apr 1;49(1):156-7
  • Latest
    J:262380 Watson-Scales S, et al., Analysis of motor dysfunction in Down Syndrome reveals motor neuron degeneration. PLoS Genet. 2018 May;14(5):e1007383

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory