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Zfp239
Gene Detail
Symbol

Name
ID
Zfp239
zinc finger protein 239
MGI:1306812
Synonyms
Mok2, Mok-2
Feature Type
protein coding gene
Genetic Map
Chromosome 6
55.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr6:117862100-117873291 bp, + strand
From VEGA annotation of GRCm38

  11192 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68480  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Zfp239

Human
homologs
Human Homolog ZNF239, zinc finger protein 239
NCBI Gene ID 8187
neXtProt AC  NX_Q16600
Human Synonyms  HOK-2, MOK2
Human Chr (Location)  10q11.22-q11.23; chr10:43556344-43574618 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(10) Targeted(1)
Interactions
Zfp239 interacts with 129 markers (Mir7-2, Mir22, Mir31, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process regulation of transcription, DNA-templated, transcription, DNA-templated
Component nucleus
Function DNA binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (142)    Tissues (141)    Images (9)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 134
RT-PCR 8
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(18) Genomic(3) cDNA(12) Primer pair(3)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000022149 (Evidence)
Ensembl Gene ModelENSMUSG00000042097 (Evidence)
Entrez Gene22685 (Evidence)
DFCITC1636731, TC1626074, TC1579945
DoTSDT.101227446, DT.532223, DT.101371283
NIA Mouse Gene IndexU043940
Consensus CDS ProjectCCDS20466.1
International Mouse Knockout Project StatusZfp239
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022149 VEGA Gene Model | MGI Sequence Detail 11192 C57BL/6J ±  kb
transcript OTTMUST00000052590 VEGA | MGI Sequence Detail 3158 Not Applicable 
polypeptide OTTMUSP00000024957 VEGA | MGI Sequence Detail 201 Not Applicable 

For the selected sequences
All sequences(59) RefSeq(20) UniProt(1)
Polymorphisms
PCR(2) : SNPs within 2kb(42 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000017774 zinc finger protein 239
References
(Earliest) J:10173 Ernoult-Lange M, et al., A gene that encodes a protein consisting solely of zinc finger domains is preferentially expressed in transformed mouse cells. Mol Cell Biol. 1990 Jan;10(1):418-21
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(39)
Other
accession IDs
MGD-MRK-12350, MGD-MRK-12351, MGI:97048

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory