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Map1a
Gene Detail
 Symbol
Name
ID
Map1a
microtubule-associated protein 1 A
MGI:1306776
Synonyms 6330416M19Rik, Mtap1, Mtap-1, Mtap1a
Feature Type protein coding gene
Genetic Map
Chromosome 2
60.37 cM
Detailed Genetic Map ± 1 cM


Mapping data(16)
Sequence Map
Chr2:121289600-121310832 bp, + strand
From VEGA annotation of GRCm38

  21233 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:1778  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Map1a

Human
homologs
Human Homolog MAP1A, microtubule-associated protein 1A
NCBI Gene ID 4130
neXtProt AC  NX_P78559
Human Synonyms  MAP1L, MTAP1A
Human Chr (Location)  15q15.3; chr15:43510967-43531620 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(21) : Gene trapped(17) QTL(2) Targeted(2)
Incidental mutations (data from APF )
Interactions
Map1a interacts with 400 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process microtubule cytoskeleton organization, negative regulation of microtubule depolymerization, ...
Component cytoplasm, cytoskeleton, ...
Function actin binding, collagen binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (3)    Tissues (1)   
Theiler Stages: 26
Assay TypeResults
Western blot 3
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(11) cDNA(10) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000015225 (Evidence)
Ensembl Gene ModelENSMUSG00000027254 (Evidence)
Entrez Gene17754 (Evidence)
NIA Mouse Gene IndexU042352
Consensus CDS ProjectCCDS38215.1, CCDS50685.1
International Mouse Knockout Project StatusMap1a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015225 VEGA Gene Model | MGI Sequence Detail 21233 C57BL/6J ±  kb
transcript OTTMUST00000036069 VEGA | MGI Sequence Detail 11825 Not Applicable 
polypeptide OTTMUSP00000016203 VEGA | MGI Sequence Detail 3014 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(6) UniProt(2)
Polymorphisms RFLP(3) : SNPs within 2kb(102 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001279 Beta-lactamase-like
InterPro IPR026074 Microtubule associated protein 1
InterPro IPR015656 Microtubule associated protein 1A
Protein Ontology PR:000010116 microtubule-associated protein 1A
References (Earliest) J:10560 Garner CC, et al., Molecular cloning of microtubule-associated protein 1 (MAP1A) and microtubule-associated protein 5 (MAP1B): identification of distinct genes and their differential expression in developing brain. J Neurochem. 1990 Jul;55(1):146-54
(Latest) J:184429 Yu Z, et al., Identification of neuroglobin-interacting proteins using yeast two-hybrid screening. Neuroscience. 2012 Jan 3;200:99-105
All references(55)
Other
accession IDs
MGD-MRK-12579, MGD-MRK-12584, MGI:1346024, MGI:1921253, MGI:2139097, MGI:97174

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory