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Tspan7
Gene Detail
Symbol

Name
ID
Tspan7
tetraspanin 7
MGI:1298407
Synonyms
1200014P11Rik, A15, Cd231, PE31, TALLA, Tm4sf2
Feature Type
protein coding gene
Genetic Map
Chromosome X
4.85 cM, cytoband A1.3-A2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:10485158-10596605 bp, + strand
From VEGA annotation of GRCm38

  111448 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20967  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TSPAN7
Protein SuperFamily: tetraspanin
Gene Tree: Tspan7

Human
homologs
TSPAN7, tetraspanin 7
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 7102
neXtProt AC: NX_P41732

Human Synonyms: A15, CCG-B7, CD231, DXS1692E, MRX58, MXS1, TALLA-1, TM4SF2, TM4SF2b

Human Chr (Location): Xp11.4; chrX:38561478-38688918 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human TSPAN7

Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from CvDC )
Interactions
Tspan7 interacts with 446 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Component integral component of membrane, membrane
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (221)    Tissues (57)    Images (36)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 221
cDNA source data(153)
Other mouse links: Allen Institute   GENSAT   GEO   Expression Atlas
Other vertebrate links: Xenbase tspan7 ; ZFIN tspan7b    NEW 
Molecular
reagents
All nucleic(153) cDNA(153)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000016730 (Evidence)
Ensembl Gene Model ENSMUSG00000058254 (Evidence)
Entrez Gene 21912 (Evidence)
UniGene 18590
DFCI TC1573292
DoTS DT.101290080, DT.103578673, DT.55101173, DT.97353203
NIA Mouse Gene Index U019701
Consensus CDS Project CCDS30016.1
International Mouse Phenotyping Consortium Status Tspan7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016730 VEGA Gene Model | MGI Sequence Detail 111448 C57BL/6J ±  kb
transcript OTTMUST00000040544 VEGA | MGI Sequence Detail 1733 Not Applicable 
polypeptide OTTMUSP00000018121 VEGA | MGI Sequence Detail 249 Not Applicable 

For the selected sequences
All sequences(42) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(398 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000301 Tetraspanin
InterPro IPR018503 Tetraspanin, conserved site
InterPro IPR008952 Tetraspanin, EC2 domain
InterPro IPR018499 Tetraspanin/Peripherin
Protein Ontology PR:000016753 tetraspanin-7
References
(Earliest) J:49742 Kuroiwa A, et al., Comparative FISH mapping of mouse and rat homologues of twenty-five human X-linked genes. Cytogenet Cell Genet. 1998;81(3-4):208-12
(Latest) J:181586 Hald J, et al., Pancreatic islet and progenitor cell surface markers with cell sorting potential. Diabetologia. 2012 Jan;55(1):154-65
All references(39)
Other
accession IDs
MGI:1923526, MGI:2147872, MGI:2148083

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory