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Tspan7
Gene Detail
Symbol

Name
ID
Tspan7
tetraspanin 7
MGI:1298407
Synonyms
1200014P11Rik, A15, Cd231, PE31, TALLA, Tm4sf2
Feature Type
protein coding gene
Genetic Map
Chromosome X
4.85 cM, cytoband A1.3-A2
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
ChrX:10485158-10596605 bp, + strand
From VEGA annotation of GRCm38

  111448 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20967  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: tetraspanin
Gene Tree: Tspan7

Human
homologs
Human Homolog TSPAN7, tetraspanin 7
NCBI Gene ID 7102
neXtProt AC  NX_P41732
Human Synonyms  A15, CCG-B7, CD231, DXS1692E, MRX58, MXS1, TALLA-1, TM4SF2, TM4SF2b
Human Chr (Location)  Xp11.4; chrX:38561478-38688918 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human TSPAN7
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Interactions
Tspan7 interacts with 447 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Component integral component of membrane, membrane
External Resources: FuncBase
Expression
Literature Summary: (7 records)
Data Summary: Results (221)    Tissues (57)    Images (36)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 221
cDNA source data(153)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(153) cDNA(153)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000016730 (Evidence)
Ensembl Gene ModelENSMUSG00000058254 (Evidence)
Entrez Gene21912 (Evidence)
UniGene18590
DFCITC1573292
DoTSDT.97353203, DT.55101173, DT.101290080, DT.103578673
NIA Mouse Gene IndexU019701
Consensus CDS ProjectCCDS30016.1
International Mouse Knockout Project StatusTspan7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016730 VEGA Gene Model | MGI Sequence Detail 111448 C57BL/6J ±  kb
transcript OTTMUST00000040544 VEGA | MGI Sequence Detail 1733 Not Applicable 
polypeptide OTTMUSP00000018121 VEGA | MGI Sequence Detail 249 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(4) UniProt(7)
Polymorphisms
SNPs within 2kb(398 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000301 Tetraspanin
InterPro IPR018503 Tetraspanin, conserved site
InterPro IPR008952 Tetraspanin, EC2 domain
InterPro IPR018499 Tetraspanin/Peripherin
Protein Ontology PR:000016753 tetraspanin-7
References
(Earliest) J:49742 Kuroiwa A, et al., Comparative FISH mapping of mouse and rat homologues of twenty-five human X-linked genes. Cytogenet Cell Genet. 1998;81(3-4):208-12
(Latest) J:181586 Hald J, et al., Pancreatic islet and progenitor cell surface markers with cell sorting potential. Diabetologia. 2012 Jan;55(1):154-65
All references(40)
Other
accession IDs
MGI:1923526, MGI:2147872, MGI:2148083

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/18/2014
MGI 5.20
The Jackson Laboratory