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Tspyl1
Gene Detail
Symbol

Name
ID
Tspyl1
testis-specific protein, Y-encoded-like 1
MGI:1298395
Feature Type
protein coding gene
Genetic Map
Chromosome 10
18.85 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:34282190-34285275 bp, + strand
From VEGA annotation of GRCm38

  3086 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:22522  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 3 cattle; 1 dog

HCOP human homology predictions: TSPYL1
Gene Tree: Tspyl1

Human
homologs
TSPYL1, TSPY-like 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 7259
neXtProt AC: NX_Q9H0U9

Human Synonyms: TSPYL

Human Chr (Location): 6q22.1; chr6:116274859-116280117 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human TSPYL1

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tspyl1 interacts with 240 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process nucleosome assembly
Component nucleolus, nucleus
Function enzyme binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (18)    Tissues (15)    Tissue x Stage Matrix (view)
Assay TypeResults
Northern blot 8
RT-PCR 10
cDNA source data(83)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(84) cDNA(83) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000020928 (Evidence)
Ensembl Gene Model ENSMUSG00000047514 (Evidence)
Entrez Gene 22110 (Evidence)
UniGene 20445
DFCI TC1571943
DoTS DT.97390268, DT.60118806
NIA Mouse Gene Index U011395
Consensus CDS Project CCDS23777.1
International Mouse Phenotyping Consortium Status Tspyl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000020928 VEGA Gene Model | MGI Sequence Detail 3086 C57BL/6J ±  kb
transcript OTTMUST00000049476 VEGA | MGI Sequence Detail 3086 Not Applicable 
polypeptide OTTMUSP00000022928 VEGA | MGI Sequence Detail 379 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(26 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002164 Nucleosome assembly protein (NAP)
Protein Ontology PR:000016760 testis-specific Y-encoded-like protein 1
References
(Earliest) J:49743 Vogel T, et al., Murine and human TSPYL genes: novel members of the TSPY-SET-NAP1L1 family. Cytogenet Cell Genet. 1998;81(3-4):265-70
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(21)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory