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Tpd52l1 Gene Detail
Summary
  • Symbol
    Tpd52l1
  • Name
    tumor protein D52-like 1
  • Synonyms
    D53
  • Feature Type
    protein coding gene
  • IDs
    MGI:1298386
    NCBI Gene: 21987
  • Gene Overview
    MyGene.info: TPD52L1
Location & Maps
more
  • Sequence Map
    Chr10:31332380-31445921 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      113542 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 17.36 cM, cytoband A4-B2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TPD52L1, tumor protein D52-like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TPD52L1, tumor protein D52-like 1
    Orthology source: HomoloGene
  • Synonyms
    D53
  • Links
    NCBI Gene ID: 7164
    neXtProt AC: NX_Q16890

  • Chr Location
    6q22-q23; chr6:125153729-125263498 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    1
  • Genomic Mutations
    1 involving Tpd52l1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000000296 Ensembl Gene Model | MGI Sequence Detail 113542 C57BL/6J ±  kb
transcript ENSMUST00000000305 Ensembl | MGI Sequence Detail 1267 Not Applicable  
polypeptide ENSMUSP00000000305 Ensembl | MGI Sequence Detail 204 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    625 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000016572 tumor protein D53
  • InterPro Domains
    IPR007327 Tumour protein D52
Molecular
Reagents
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  • All nucleic 38
    Genomic 1
    cDNA 36
    Other 1

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:49741 Byrne JA, et al., Identification and in situ hybridization mapping of a mouse Tpd52l1 (D53) orthologue to chromosome 10A4-B2. Cytogenet Cell Genet. 1998;81(3-4):199-201
  • Latest
    J:226028 Lewandowski JP, et al., Spatiotemporal regulation of GLI target genes in the mammalian limb bud. Dev Biol. 2015 Oct 1;406(1):92-103

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory