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Rpl9 Gene Detail
Summary
  • Symbol
    Rpl9
  • Name
    ribosomal protein L9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1298373
    NCBI Gene: 20005
  • Gene Overview
    MyGene.info: RPL9
Location & Maps
more
  • Sequence Map
    Chr5:65388364-65391444 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3081 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 33.66 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    RPL9, ribosomal protein L9
  • Vertebrate Orthologs
    11
  • Human Ortholog
    RPL9, ribosomal protein L9
    Orthology source: HomoloGene
  • Synonyms
    L9, NPC-A-16
  • Links
    NCBI Gene ID: 6133
    neXtProt AC: NX_P32969

  • Chr Location
    4p13; chr4:39454124-39458948 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    2
  • Gene trapped
    3
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Rpl9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028344 VEGA Gene Model | MGI Sequence Detail 3081 C57BL/6J ±  kb
transcript OTTMUST00000070257 VEGA | MGI Sequence Detail 738 Not Applicable  
polypeptide OTTMUSP00000035773 VEGA | MGI Sequence Detail 192 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    56 from dbSNP Build 142
Protein
Information
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  • UniProt
    7 Sequences
  • InterPro Domains
    IPR000702 Ribosomal protein L6
    IPR020040 Ribosomal protein L6, alpha-beta domain
    IPR002359 Ribosomal protein L6, conserved site-2
Molecular
Reagents
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  • All nucleic 16
    cDNA 16

    Microarray probesets 10
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 20
  • Earliest
    J:49488 Monach PA, et al., A unique tumor antigen produced by a single amino acid substitution. Immunity. 1995 Jan;2(1):45-59
  • Latest
    J:173414 Kondrashov N, et al., Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning. Cell. 2011 Apr 29;145(3):383-97

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory