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Naip3
Pseudogene Detail
 Symbol
Name
ID
Naip3
NLR family, apoptosis inhibitory protein 3
MGI:1298225
Synonyms Birc1c, EG667838, Naip3, Naip-rs5
Feature Type pseudogene
Genetic Map
Chromosome 13
53.13 cM, cytoband D1-D3
Detailed Genetic Map ± 1 cM


Mapping data(9)
Sequence Map
Chr13:100339485-100378960 bp, - strand
From VEGA annotation of GRCm38

  39476 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: neuronal apoptosis inhibitory protein
Gene Tree: Naip3
Gene Ontology
(GO)
classifications
All GO classifications: (1 annotations)
Process cellular response to estrogen stimulus
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (10)    Tissues (8)   
Theiler Stages: 22, 28
Assay TypeResults
RT-PCR 10
External Resources: GEO   ArrayExpress
Molecular
reagents
All nucleic(9) Genomic(6) Primer pair(3)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000028713 (Evidence)
Ensembl Gene ModelENSMUSG00000082956 (Evidence)
Entrez Gene667838 (Evidence)
International Mouse Knockout Project StatusNaip3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028713 VEGA Gene Model | MGI Sequence Detail 39476 C57BL/6J ±  kb
transcript OTTMUST00000071112 VEGA | MGI Sequence Detail 4867 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2)
Polymorphisms PCR(2) : SNPs within 2kb(586 from dbSNP Build 137)    SNPs within 2kb including multiple locations(862)
References (Earliest) J:37707 Scharf JM, et al., The mouse region syntenic for human spinal muscular atrophy lies within the Lgn1 critical interval and contains multiple copies of Naip exon 5. Genomics. 1996 Dec 15;38(3):405-17
(Latest) J:130045 Yin Y, et al., Estrogen suppresses uterine epithelial apoptosis by inducing birc1 expression. Mol Endocrinol. 2008 Jan;22(1):113-25
All references(20)
Other
accession IDs
MGD-MRK-38480, MGI:109435, MGI:3643711

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory