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Naip6 Gene Detail
Summary
  • Symbol
    Naip6
  • Name
    NLR family, apoptosis inhibitory protein 6
  • Synonyms
    Birc1f, Naip-rs4, Naip-rs4A
  • Feature Type
    protein coding gene
  • IDs
    MGI:1298222
    NCBI Gene: 17952
  • Member of
    Naipc cluster
  • Gene Overview
    MyGene.info: NAIP
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:100281121-100316616 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 53.09 cM, cytoband D1-D3
  • Mapping Data
    9 experiments
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    7
  • PCR
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1298222
protein coding gene Chr13:100281121-100317674 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020884
protein coding gene Chr13:102142443-102196207 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0018838
protein coding gene Chr13:93794748-94216792 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0020585
protein coding gene Chr13:109355401-109392026 (-)
DBA/2J MGP_DBA2J_G0020711
protein coding gene Chr13:97962692-98002923 (-)
FVB/NJ MGP_FVBNJ_G0020692
protein coding gene Chr13:96708842-96759880 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020720
protein coding gene Chr13:109474749-109567565 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    NAIP, NLR family apoptosis inhibitory protein
  • Vertebrate Orthologs
    5
  • Human Ortholog
    NAIP, NLR family apoptosis inhibitory protein
    Orthology source: HGNC
  • Synonyms
    BIRC1, NLRB1, psiNAIP
  • Links
    NCBI Gene ID: 4671
    neXtProt AC: NX_Q13075
    UniProt: Q13075

  • Chr Location
    5q13.2; chr5:70968483-71025114 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 17952 NCBI Gene Model | MGI Sequence Detail 35496 C57BL/6J ±  kb
transcript NM_010871 RefSeq | MGI Sequence Detail 6705 Not Specified  
polypeptide Q9JIB6 UniProt | EBI | MGI Sequence Detail 1403 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    Genomic 9
    cDNA 4
    Primer pair 3

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-38481, MGI:109436
References
more
  • Summaries
    All 32
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:37707 Scharf JM, et al., The mouse region syntenic for human spinal muscular atrophy lies within the Lgn1 critical interval and contains multiple copies of Naip exon 5. Genomics. 1996 Dec 15;38(3):405-17
  • Latest
    J:233320 Rauch I, et al., NAIP proteins are required for cytosolic detection of specific bacterial ligands in vivo. J Exp Med. 2016 May 2;213(5):657-65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory