About   Help   FAQ
Dop1a Gene Detail
Summary
  • Symbol
    Dop1a
  • Name
    DOP1 leucine zipper like protein A
  • Synonyms
    B130005I07Rik, D9Ertd809e, Dopey1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1289294
    NCBI Gene: 320615
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:86467154-86555806 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 46.58 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    695 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1289294
protein coding gene Chr9:86467154-86555923 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035095
protein coding gene Chr9:87289103-87385683 (+)
A/J MGP_AJ_G0035076
protein coding gene Chr9:84239228-84340805 (+)
AKR/J MGP_AKRJ_G0035004
protein coding gene Chr9:86242187-86331753 (+)
BALB/cJ MGP_BALBcJ_G0035064
protein coding gene Chr9:83879957-83976919 (+)
C3H/HeJ MGP_C3HHeJ_G0034776
protein coding gene Chr9:86701871-86794033 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035588
protein coding gene Chr9:89636547-89739757 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032495
protein coding gene Chr9:83026122-83100880 (+)
CAST/EiJ MGP_CASTEiJ_G0034094
protein coding gene Chr9:87179432-87270513 (+)
CBA/J MGP_CBAJ_G0034749
protein coding gene Chr9:92845245-92931275 (+)
DBA/2J MGP_DBA2J_G0034907
protein coding gene Chr9:83787231-83881534 (+)
FVB/NJ MGP_FVBNJ_G0034850
protein coding gene Chr9:82901807-82988602 (+)
LP/J MGP_LPJ_G0034988
protein coding gene Chr9:87506509-87598007 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034892
protein coding gene Chr9:94423460-94518678 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035608
protein coding gene Chr9:86354348-86442591 (+)
PWK/PhJ MGP_PWKPhJ_G0033798
protein coding gene Chr9:83977228-84065411 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033634
protein coding gene Chr9:86558527-86654225 (+)
WSB/EiJ MGP_WSBEiJ_G0034211
protein coding gene Chr9:86384811-86477726 (+)



Homology
more
  • Human Ortholog
    DOP1A, DOP1 leucine zipper like protein A
  • Vertebrate Orthologs
    10
  • Human Ortholog
    DOP1A, DOP1 leucine zipper like protein A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ202D23.2, DOP1, DOPEY1, KIAA1117
  • Links
    NCBI Gene ID: 23033
    neXtProt AC: NX_Q5JWR5
    UniProt: Q5JWR5

  • Chr Location
    6q14.1; chr6:83067650-83171351 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 26645
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: DOP1A
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 320615 NCBI Gene Model | MGI Sequence Detail 88653 C57BL/6J ±  kb
transcript NM_177208 RefSeq | MGI Sequence Detail 9124 Not Specified  
polypeptide Q8BL99 UniProt | EBI | MGI Sequence Detail 2399 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 21
    cDNA 19
    Primer pair 2

    Microarray probesets 3
Other
Accession IDs
less
MGI:2444370, MGI:2449769
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:193641 Nakano Y, et al., A mutation in the Srrm4 gene causes alternative splicing defects and deafness in the Bronx waltzer mouse. PLoS Genet. 2012;8(10):e1002966

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/01/2019
MGI 6.14
The Jackson Laboratory