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Cfap43 Gene Detail
Summary
  • Symbol
    Cfap43
  • Name
    cilia and flagella associated protein 43
  • Synonyms
    4632415N18Rik, 4930428C11Rik, 4930463G05Rik, D19Ertd652e, Wdr96
  • Feature Type
    protein coding gene
  • IDs
    MGI:1289258
    NCBI Gene: 100048534
Location & Maps
more
  • Sequence Map
    Chr19:47737561-47919287 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      181727 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 40.41 cM, cytoband D2
  • Mapping Data
    4 experiments
Homology
more
  • Human Ortholog
    CFAP43, cilia and flagella associated protein 43
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CFAP43, cilia and flagella associated protein 43
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA373N18.2, C10orf79, WDR96
  • Links
    NCBI Gene ID: 80217
    neXtProt AC: NX_Q8NDM7

  • Chr Location
    10q25.1; chr10:104129888-104232366 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 36425
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CFAP43
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034162 VEGA Gene Model | MGI Sequence Detail 181727 C57BL/6J ±  kb
transcript OTTMUST00000086578 VEGA | MGI Sequence Detail 5264 Not Applicable  
polypeptide OTTMUSP00000046885 VEGA | MGI Sequence Detail 1682 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1335 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR011044 Quinoprotein amine dehydrogenase, beta chain-like
    IPR001680 WD40 repeat
    IPR017986 WD40-repeat-containing domain
    IPR015943 WD40/YVTN repeat-like-containing domain
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
less
MGI:1918056, MGI:1918886, MGI:1922174, MGI:2147530
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory