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Pcm1
Gene Detail
 Symbol
Name
ID
Pcm1
pericentriolar material 1
MGI:1277958
Synonyms 2600002H09Rik, 9430077F19Rik, C030044G17Rik
Feature Type protein coding gene
Genetic Map
Chromosome 8
23.89 cM
Detailed Genetic Map ± 1 cM


Mapping data(4)
Sequence Map
Chr8:41239759-41334086 bp, + strand
From Ensembl annotation of GRCm38

  94328 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4518  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Pcm1

Human
homologs
Human Homolog PCM1, pericentriolar material 1
NCBI Gene ID 5108
neXtProt AC  NX_Q15154
Human Synonyms  PTC4
Human Chr (Location)  8p22-p21.3; chr8:17922857-18029948 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human PCM1
Alleles
and
phenotypes
All alleles(42) : Gene trapped(41) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (30 annotations)
Process cell projection organization, centrosome organization, ...
Component cell, cell projection, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (6 records)
cDNA source data(16)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(19) Genomic(1) cDNA(17) Primer pair(1)
Microarray probesets(6)
Other database
links
Ensembl Gene ModelENSMUSG00000031592 (Evidence)
Entrez Gene18536 (Evidence)
DFCITC1575336, TC1599157, TC1639508
DoTSDT.101390230, DT.103569446, DT.489409, DT.55282118
NIA Mouse Gene IndexU009290
Consensus CDS ProjectCCDS22261.1
International Mouse Knockout Project StatusPcm1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000031592 Ensembl Gene Model | MGI Sequence Detail 94328 C57BL/6J ±  kb
transcript ENSMUST00000045218 Ensembl | MGI Sequence Detail 8380 Not Applicable 
polypeptide ENSMUSP00000039709 Ensembl | MGI Sequence Detail 2025 Not Applicable 

For the selected sequences
All sequences(54) RefSeq(18) UniProt(2)
Polymorphisms PCR(1) : SNPs within 2kb(489 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR024138 Pericentriolar material 1 protein
Protein Ontology PR:000012419 pericentriolar material 1 protein
References (Earliest) J:28401 Bettenhausen B, et al., Efficient isolation of novel mouse genes differentially expressed in early postimplantation embryos. Genomics. 1995 Aug 10;28(3):436-41
(Latest) J:208267 Kobayashi T, et al., The CP110-interacting proteins Talpid3 and Cep290 play overlapping and distinct roles in cilia assembly. J Cell Biol. 2014 Jan 20;204(2):215-29
All references(46)
Other
accession IDs
MGI:1919589, MGI:1924673, MGI:1924736

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory