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Obp1b Gene Detail
Summary
  • Symbol
    Obp1b
  • Name
    odorant binding protein IB
  • Synonyms
    EG628991, OBP-1b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277948
    NCBI Gene: 628991
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:78186808-78192242 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 38.33 cM, cytoband A7.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1277948
protein coding gene ChrX:78186777-78192292 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035876
protein coding gene ChrX:74035638-74041158 (+)
A/J MGP_AJ_G0035862
protein coding gene ChrX:74313883-74322989 (+)
AKR/J MGP_AKRJ_G0035780
protein coding gene ChrX:76275043-76280793 (+)
BALB/cJ MGP_BALBcJ_G0035843
protein coding gene ChrX:73319285-73324818 (-)
C3H/HeJ MGP_C3HHeJ_G0035553
protein coding gene ChrX:74505878-74511403 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036375
protein coding gene ChrX:76441265-76446730 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0034841
protein coding gene ChrX:59737157-59743425 (+)
CBA/J MGP_CBAJ_G0035528
protein coding gene ChrX:78464450-78469935 (-)
DBA/2J MGP_DBA2J_G0035683
protein coding gene ChrX:73749009-73754530 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0035771
protein coding gene ChrX:74915476-74920988 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035659
protein coding gene ChrX:81196246-81201673 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036400
protein coding gene ChrX:73888570-73894067 (+)
PWK/PhJ MGP_PWKPhJ_G0034539
protein coding gene ChrX:57860804-57866560 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034371
protein coding gene ChrX:60593063-60598569 (-)
WSB/EiJ MGP_WSBEiJ_G0034980
protein coding gene ChrX:73076863-73082415 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 628991 NCBI Gene Model | MGI Sequence Detail 5435 C57BL/6J ±  kb
transcript NM_001310328 RefSeq | MGI Sequence Detail 716 C57BL/6  
polypeptide A2AEP0 UniProt | EBI | MGI Sequence Detail 171 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:3647231
References
more
  • Summaries
    All 14
    Gene Ontology 3
  • Earliest
    J:48070 Pes D, et al., Cloning and expression of odorant-binding proteins Ia and Ib from mouse nasal tissue. Gene. 1998 May 28;212(1):49-55
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/19/2021
MGI 6.16
The Jackson Laboratory