Sept11
Gene Detail

Symbol Name ID

Sept11 septin 11 MGI:1277214

Synonyms

6230410I01Rik, D5Ertd606e

Feature Type

protein coding gene

Genetic Map

Chromosome 5

47.29 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr5:93093457-93174958 bp, + strand From NCBI annotation of GRCm38   81502 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:56800  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: septin
Gene Tree: Sept11

Human homologs

Human Homolog		SEPT11, septin 11
NCBI Gene ID		55752
neXtProt AC		NX_Q9NVA2
Human Chr (Location)		4q21.1; chr4:77870895-77959768 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(48) : Targeted(2) Gene trapped(46)

Gene Ontology (GO) classifications

All GO classifications: (14 annotations)

Process	cell cycle, cell division, ...
Component	cell junction, cell projection, ...
Function	GTP binding, nucleotide binding

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (4)    Tissues (4)    Images (1)
Theiler Stages: 17, 20, 22, 24

Assay Type	Results
RNA in situ	4

cDNA source data(25)
External Resources: GEO   ArrayExpress

Molecular reagents

All nucleic(26) cDNA(25) Primer pair(1)
Microarray probesets(7)

Other database links

Ensembl Gene Model	ENSMUSG00000058013 (Evidence)
Entrez Gene	52398 (Evidence)
DFCI	TC1574346, TC1587456, TC1655357, TC1667544, TC1720919, TC1722012
DoTS	DT.101146720, DT.101253057, DT.103575783, DT.110665280, DT.40147309, DT.533437
NIA Mouse Gene Index	U042653
Consensus CDS Project	CCDS51549.1
International Mouse Knockout Project Status	Sept11

Sequences

Length	Strain/Species
genomic	52398	NCBI Gene Model | MGI Sequence Detail	81502	C57BL/6J
transcript	NM_001009818	RefSeq | MGI Sequence Detail	5123	C57BL/6
polypeptide	Q8C1B7	UniProt | EBI | MGI Sequence Detail	431	Not Applicable

All sequences(48) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(680 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR000038	Cell division protein GTP binding
InterPro	IPR016491	Septin
Protein Ontology	PR:000014650	septin-11

Graphical View of Protein Domain Structure

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:186260 Yoshida A, et al., Localization of septin proteins in the mouse cochlea. Hear Res. 2012 Jul;289(1-2):40-51
All references(37)

Other accession IDs

MGI:1915030, MGI:2141224