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Sept11
Gene Detail
 Symbol
Name
ID
Sept11
septin 11
MGI:1277214
Synonyms 6230410I01Rik, D5Ertd606e
Feature Type protein coding gene
Genetic Map
Chromosome 5
47.29 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:93093457-93174958 bp, + strand
From NCBI annotation of GRCm38

  81502 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56800  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: septin
Gene Tree: Sept11

Human
homologs
Human Homolog SEPT11, septin 11
NCBI Gene ID 55752
neXtProt AC  NX_Q9NVA2
Human Chr (Location)  4q21.1; chr4:76949742-77040154 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(48) : Gene trapped(46) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Sept11 interacts with 384 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process cell cycle, cell division, ...
Component cell junction, cell projection, ...
Function GTP binding, nucleotide binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (4)    Tissues (4)    Images (1)
Theiler Stages: 17, 20, 22, 24
Assay TypeResults
RNA in situ 4
cDNA source data(26)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(27) cDNA(26) Primer pair(1)
Microarray probesets(7)
Other database
links
Ensembl Gene ModelENSMUSG00000058013 (Evidence)
Entrez Gene52398 (Evidence)
DFCITC1574346, TC1587456, TC1655357, TC1667544, TC1720919, TC1722012
DoTSDT.101146720, DT.101253057, DT.103575783, DT.110665280, DT.40147309, DT.533437, DT.97379743
NIA Mouse Gene IndexU042653, U169102
Consensus CDS ProjectCCDS51549.1
International Mouse Knockout Project StatusSept11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 52398 NCBI Gene Model | MGI Sequence Detail 81502 C57BL/6J ±  kb
transcript NM_001009818 RefSeq | MGI Sequence Detail 5123 C57BL/6 
polypeptide Q8C1B7 UniProt | EBI | MGI Sequence Detail 431 Not Applicable 

For the selected sequences
All sequences(74) RefSeq(25) UniProt(1)
Polymorphisms SNPs within 2kb(803 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000038 Cell division protein GTP binding
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR016491 Septin
Protein Ontology PR:000014650 septin-11
Graphical View of Protein Domain Structure
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:186260 Yoshida A, et al., Localization of septin proteins in the mouse cochlea. Hear Res. 2012 Jul;289(1-2):40-51
All references(37)
Other
accession IDs
MGI:1915030, MGI:2141224

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory