About   Help   FAQ
Sept11
Gene Detail
Symbol

Name
ID
Sept11
septin 11
MGI:1277214
Synonyms
6230410I01Rik, D5Ertd606e
Feature Type
protein coding gene
Genetic Map
Chromosome 5
47.29 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:93093457-93174958 bp, + strand
From Ensembl annotation of GRCm38

  81502 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56800  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SEPT11
Protein SuperFamily: septin
Gene Tree: Sept11

Human
homologs
SEPT11, septin 11
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55752
neXtProt AC: NX_Q9NVA2

Human Chr (Location): 4q21.1; chr4:76949742-77040154 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(48) : Gene trapped(46) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Sept11 interacts with 383 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process cell cycle, cell division, ...
Component cell junction, cell projection, ...
Function GTP binding, nucleotide binding
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (4)    Tissues (4)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 4
cDNA source data(27)
Other mouse links: GEO   Expression Atlas
Other vertebrate links: Xenbase sept11    NEW 
Molecular
reagents
All nucleic(28) cDNA(27) Primer pair(1)
Microarray probesets(7)
Other database
links
Ensembl Gene Model ENSMUSG00000058013 (Evidence)
Entrez Gene 52398 (Evidence)
DFCI TC1574346, TC1587456, TC1655357, TC1667544, TC1720919, TC1722012
DoTS DT.101146720, DT.101253057, DT.103575783, DT.110665280, DT.40147309, DT.533437, DT.97379743
NIA Mouse Gene Index U042653, U169102
Consensus CDS Project CCDS51549.1, CCDS80331.1, CCDS80332.1
International Mouse Phenotyping Consortium Status Sept11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058013 Ensembl Gene Model | MGI Sequence Detail 81502 C57BL/6J ±  kb
transcript ENSMUST00000074733 Ensembl | MGI Sequence Detail 5008 Not Applicable 
polypeptide ENSMUSP00000074293 Ensembl | MGI Sequence Detail 429 Not Applicable 

For the selected sequences
All sequences(83) RefSeq(31) UniProt(1)
Polymorphisms
SNPs within 2kb(803 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
InterPro IPR016491 Septin
InterPro IPR030379 Septin-type guanine nucleotide-binding (G) domain
Protein Ontology PR:000014650 septin-11
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:186260 Yoshida A, et al., Localization of septin proteins in the mouse cochlea. Hear Res. 2012 Jul;289(1-2):40-51
All references(36)
Other
accession IDs
MGI:1915030, MGI:2141224

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/25/2015
MGI 6.0
The Jackson Laboratory