Zfp644
Gene Detail

Symbol Name ID

Zfp644 zinc finger protein 644 MGI:1277212

Synonyms

1110068L01Rik, BM-005, D5Ertd689e, mKIAA1221, Zep-2

Feature Type

protein coding gene

Genetic Map

Chromosome 5

51.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr5:106616739-106697287 bp, - strand From VEGA annotation of GRCm38   80549 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:12971  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Zfp644

Human homologs

Human Homolog		ZNF644, zinc finger protein 644
NCBI Gene ID		84146
neXtProt AC		NX_Q9H582
Human Synonyms		BM-005, MYP21, NatF, ZEP-2
Human Chr (Location)		1p22.2; chr1:90915298-91022255 (-)  GRCh38
Disease Associations		(1) Diseases Associated with Human ZNF644

Mutations, alleles, and phenotypes

All mutations/alleles(3) : Chemically induced (ENU)(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 

Mice homozygous for an ENU-induced allele exhibit normal blood lymphocyte populations.

 

Interactions

Zfp644 interacts with 385 markers (Mir1a-1, Mir1a-2, Mir1b, ...)

View All

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (1 records)

Data Summary: Results (15)    Tissues (13)   
Theiler Stages: 2, 3, 4, 5, 28

Assay Type	Results
RT-PCR	15

cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular reagents

All nucleic(14) cDNA(12) Primer pair(2)
Microarray probesets(6)

Other database links

VEGA Gene Model	OTTMUSG00000023248 (Evidence)
Ensembl Gene Model	ENSMUSG00000049606 (Evidence)
Entrez Gene	52397 (Evidence)
DFCI	TC1579486, TC1602156, TC1605304, TC1607187, TC1613120, TC1700795
DoTS	DT.101357126, DT.101364835, DT.490631, DT.55226473, DT.91383270, DT.94181081
NIA Mouse Gene Index	U026509
Consensus CDS Project	CCDS39196.1
International Mouse Knockout Project Status	Zfp644

Sequences

Length	Strain/Species
genomic	OTTMUSG00000023248	VEGA Gene Model | MGI Sequence Detail	80549	C57BL/6J
transcript	OTTMUST00000056288	VEGA | MGI Sequence Detail	5785	Not Applicable
polypeptide	OTTMUSP00000027033	VEGA | MGI Sequence Detail	1323	Not Applicable

All sequences(146) RefSeq(42) UniProt(15)

Polymorphisms

SNPs within 2kb(310 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR007087	Zinc finger, C2H2
InterPro	IPR015880	Zinc finger, C2H2-like
InterPro	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology	PR:000018050	zinc finger protein 644

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)

Other accession IDs

MGI:1916116, MGI:2140743