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Zfp644
Gene Detail
 Symbol
Name
ID
Zfp644
zinc finger protein 644
MGI:1277212
Synonyms 1110068L01Rik, BM-005, D5Ertd689e, mKIAA1221, Zep-2
Feature Type protein coding gene
Genetic Map
Chromosome 5
51.43 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr5:106616739-106697287 bp, - strand
From VEGA annotation of GRCm38

  80549 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12971  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Zfp644

Human
homologs
Human Homolog ZNF644, zinc finger protein 644
NCBI Gene ID 84146
neXtProt AC  NX_Q9H582
Human Synonyms  BM-005, MYP21, NatF, ZEP-2
Human Chr (Location)  1p22.2; chr1:90915298-91022255 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human ZNF644
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Chemically induced (ENU)(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for an ENU-induced allele exhibit normal blood lymphocyte populations.
 
Interactions
Zfp644 interacts with 385 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (15)    Tissues (13)   
Theiler Stages: 2, 3, 4, 5, 28
Assay TypeResults
RT-PCR 15
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) cDNA(12) Primer pair(2)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000023248 (Evidence)
Ensembl Gene ModelENSMUSG00000049606 (Evidence)
Entrez Gene52397 (Evidence)
DFCITC1579486, TC1602156, TC1605304, TC1607187, TC1613120, TC1700795
DoTSDT.101357126, DT.101364835, DT.490631, DT.55226473, DT.91383270, DT.94181081
NIA Mouse Gene IndexU026509
Consensus CDS ProjectCCDS39196.1
International Mouse Knockout Project StatusZfp644
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023248 VEGA Gene Model | MGI Sequence Detail 80549 C57BL/6J ±  kb
transcript OTTMUST00000056288 VEGA | MGI Sequence Detail 5785 Not Applicable 
polypeptide OTTMUSP00000027033 VEGA | MGI Sequence Detail 1323 Not Applicable 

For the selected sequences
All sequences(146) RefSeq(42) UniProt(15)
Polymorphisms SNPs within 2kb(310 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000018050 zinc finger protein 644
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:1916116, MGI:2140743

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory