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D1Ertd622e Gene Detail
Summary
  • Symbol
    D1Ertd622e
  • Name
    DNA segment, Chr 1, ERATO Doi 622, expressed
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277184
    NCBI Gene: 52392
Location & Maps
more
  • Sequence Map
    Chr1:97606318-97662074 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      55757 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 47.76 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    C5orf30, chromosome 5 open reading frame 30
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C5orf30, chromosome 5 open reading frame 30
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 90355
    neXtProt AC: NX_Q96GV9

  • Chr Location
    5q21.1; chr5:103258741-103278660 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving D1Ertd622e
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021769 VEGA Gene Model | MGI Sequence Detail 55757 C57BL/6J ±  kb
transcript OTTMUST00000051672 VEGA | MGI Sequence Detail 3495 Not Applicable  
polypeptide OTTMUSP00000062998 VEGA | MGI Sequence Detail 207 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    517 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR029219 UNC119-binding protein
Molecular
Reagents
less
  • All nucleic 52
    cDNA 51
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2138377, MGI:2138546
References
more
  • Summaries
    All 31
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:226795 Muthana M, et al., C5orf30 is a negative regulator of tissue damage in rheumatoid arthritis. Proc Natl Acad Sci U S A. 2015 Sep 15;112(37):11618-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory