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Cpsf4l Gene Detail
Summary
  • Symbol
    Cpsf4l
  • Name
    cleavage and polyadenylation specific factor 4-like
  • Synonyms
    0610010C04Rik, 1500000C01Rik, D11Ertd636e
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277182
    NCBI Gene: 52670
Location & Maps
more
  • Sequence Map
    Chr11:113698172-113710017 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      11846 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 79.17 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CPSF4L, cleavage and polyadenylation specific factor 4 like
  • Vertebrate Orthologs
    6
  • Human Ortholog
    CPSF4L, cleavage and polyadenylation specific factor 4 like
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 642843
    neXtProt AC: NX_A6NMK7

  • Chr Location
    17q25.1; chr17:73242343-73262532 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    77
  • Gene trapped
    76
  • Targeted
    1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003849 VEGA Gene Model | MGI Sequence Detail 11846 C57BL/6J ±  kb
transcript OTTMUST00000008467 VEGA | MGI Sequence Detail 1213 Not Applicable  
polypeptide OTTMUSP00000004108 VEGA | MGI Sequence Detail 228 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    222 from dbSNP Build 142
Protein
Information
less
  • UniProt
    8 Sequences
  • InterPro Domains
    IPR000571 Zinc finger, CCCH-type
Molecular
Reagents
less
  • All nucleic 25
    cDNA 24
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1915590, MGI:1924153
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory