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Echdc1 Gene Detail
Summary
  • Symbol
    Echdc1
  • Name
    enoyl Coenzyme A hydratase domain containing 1
  • Synonyms
    1700028A24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277169
    NCBI Gene: 52665
Location & Maps
more
  • Sequence Map
    Chr10:29313166-29346661 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      33496 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 16.59 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    ECHDC1, ethylmalonyl-CoA decarboxylase 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ECHDC1, ethylmalonyl-CoA decarboxylase 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ351K20.2, HEL-S-76, MMCD
  • Links
    NCBI Gene ID: 55862
    neXtProt AC: NX_Q9NTX5

  • Chr Location
    6q22.33; chr6:127288712-127344069 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Targeted
    4
  • Genomic Mutations
    1 involving Echdc1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028057 VEGA Gene Model | MGI Sequence Detail 33496 C57BL/6J ±  kb
transcript OTTMUST00000069493 VEGA | MGI Sequence Detail 3048 Not Applicable  
polypeptide OTTMUSP00000035297 VEGA | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    101 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
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  • All nucleic 20
    cDNA 18
    Primer pair 2

    Microarray probesets 3
Other
Accession IDs
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MGI:1914187, MGI:2143563, MGI:2143704
References
more
  • Summaries
    All 34
    Developmental Gene Expression 4
    Gene Ontology 5
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:182258 Taher L, et al., Global gene expression analysis of murine limb development. PLoS One. 2011;6(12):e28358

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory