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Nudcd2
Gene Detail
 Symbol
Name
ID
Nudcd2
NudC domain containing 2
MGI:1277103
Synonyms 2700047N05Rik, D11Ertd603e
Feature Type protein coding gene
Genetic Map
Chromosome 11
24.41 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:40733667-40740046 bp, + strand
From VEGA annotation of GRCm38

  6380 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12094  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Nudcd2

Human
homologs
Human Homolog NUDCD2, NudC domain containing 2
NCBI Gene ID 134492
neXtProt AC  NX_Q8WVJ2
Human Chr (Location)  5q34; chr5:163453580-163460137 (-)  GRCh38
Alleles
and
phenotypes
All alleles(41) : Gene trapped(40) Targeted(1)
Incidental mutations (data from APF )
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process biological_process
Component chromosome, chromosome, centromeric region, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (1)    Tissues (1)    Images (1)
Theiler Stages: 23
Assay TypeResults
RNA in situ 1
cDNA source data(10)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(11) cDNA(10) Primer pair(1)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000005435 (Evidence)
Ensembl Gene ModelENSMUSG00000020328 (Evidence)
Entrez Gene52653 (Evidence)
DFCITC1574976, TC1624719
DoTSDT.101399050, DT.534263, DT.94249093, DT.97379482
NIA Mouse Gene IndexU012461
PDB2RH0
Consensus CDS ProjectCCDS24549.1, CCDS70162.1
International Mouse Knockout Project StatusNudcd2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005435 VEGA Gene Model | MGI Sequence Detail 6380 C57BL/6J ±  kb
transcript OTTMUST00000012109 VEGA | MGI Sequence Detail 1577 Not Applicable 
polypeptide OTTMUSP00000005603 VEGA | MGI Sequence Detail 157 Not Applicable 

For the selected sequences
All sequences(46) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(26 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007052 CS-like domain
InterPro IPR008978 HSP20-like chaperone
Protein Ontology PR:000031537 NudC domain-containing protein 2
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)
Other
accession IDs
MGI:1914441

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory