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Snn Gene Detail
Summary
  • Symbol
    Snn
  • Name
    stannin
  • Synonyms
    2810407J07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1276549
    NCBI Gene: 20621
  • Gene Overview
    MyGene.info: SNN
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:11066298-11074985 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 6.32 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    64 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1276549
protein coding gene Chr16:11060945-11074985 (.)
129S1/SvImJ MGP_129S1SvImJ_G0022519
protein coding gene Chr16:7914609-7923309 (+)
A/J MGP_AJ_G0022481
protein coding gene Chr16:7478424-7487234 (+)
AKR/J MGP_AKRJ_G0022457
protein coding gene Chr16:7817840-7826525 (+)
BALB/cJ MGP_BALBcJ_G0022485
protein coding gene Chr16:7612652-7621338 (+)
C3H/HeJ MGP_C3HHeJ_G0022252
protein coding gene Chr16:7902238-7910936 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022934
protein coding gene Chr16:8075725-8084445 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020454
protein coding gene Chr16:7637954-7646533 (+)
CAST/EiJ MGP_CASTEiJ_G0021779
protein coding gene Chr16:7925425-7934134 (+)
CBA/J MGP_CBAJ_G0022221
protein coding gene Chr16:8432725-8441455 (+)
DBA/2J MGP_DBA2J_G0022352
protein coding gene Chr16:7485836-7494498 (+)
FVB/NJ MGP_FVBNJ_G0022328
protein coding gene Chr16:7477186-7485872 (+)
LP/J MGP_LPJ_G0022420
protein coding gene Chr16:7866644-7876253 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022350
protein coding gene Chr16:8120216-8128950 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022947
protein coding gene Chr16:7764696-7775963 (+)
PWK/PhJ MGP_PWKPhJ_G0021519
protein coding gene Chr16:7700858-7709591 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021349
protein coding gene Chr16:7835519-7844229 (+)
WSB/EiJ MGP_WSBEiJ_G0021827
protein coding gene Chr16:7860907-7869613 (+)



Homology
more
  • Human Ortholog
    SNN, stannin
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SNN, stannin
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 8303
    neXtProt AC: NX_O75324
    UniProt: O75324

  • Chr Location
    16p13.13; chr16:11668433-11679159 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 81710
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SNN
  • Protein SuperFamily
  • Gene Tree
    Snn
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 20621 NCBI Gene Model | MGI Sequence Detail 8688 C57BL/6J ±  kb
transcript NM_009223 RefSeq | MGI Sequence Detail 2919 C57BL/6  
polypeptide P61807 UniProt | EBI | MGI Sequence Detail 88 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 117
    Genomic 2
    cDNA 115

    Microarray probesets 5
Other
Accession IDs
less
MGI:1913555, MGI:2146500, MGI:2146655
References
more
  • Summaries
    All 26
    Gene Ontology 3
    Phenotypes 1
  • Earliest
    J:48703 Dejneka NS, et al., Chromosomal localization and characterization of the stannin (Snn) gene. Mamm Genome. 1998 Jul;9(7):556-64
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory