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Cyp2j6
Gene Detail
Symbol

Name
ID
Cyp2j6
cytochrome P450, family 2, subfamily j, polypeptide 6
MGI:1270148
Feature Type
protein coding gene
Genetic Map
Chromosome 4
44.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr4:96516138-96553661 bp, - strand
From VEGA annotation of GRCm38

  37524 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68091  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 4 cattle; 1 dog; 1 chicken; 2 western clawed frog; 11 zebrafish

HCOP human homology predictions: CYP2J2
Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2j6

Human
homologs
CYP2J2, cytochrome P450, family 2, subfamily J, polypeptide 2
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 1573
neXtProt AC: NX_P51589

Human Synonyms: CPJ2

Human Chr (Location): 1p31.3-p31.2; chr1:59893308-59926773 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2j6 interacts with 269 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (206)    Tissues (130)    Images (49)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 206
cDNA source data(25)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(28) cDNA(27) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000007867 (Evidence)
Ensembl Gene Model ENSMUSG00000052914 (Evidence)
Entrez Gene 13110 (Evidence)
UniGene 98200
DFCI TC1623536, TC1578534
DoTS DT.91415351, DT.487800, DT.101365095
NIA Mouse Gene Index U025277
EC 1.14.14.1
Consensus CDS Project CCDS18369.1
International Mouse Phenotyping Consortium Status Cyp2j6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007867 VEGA Gene Model | MGI Sequence Detail 37524 C57BL/6J ±  kb
transcript OTTMUST00000017897 VEGA | MGI Sequence Detail 3605 Not Applicable 
polypeptide OTTMUSP00000008224 VEGA | MGI Sequence Detail 501 Not Applicable 

For the selected sequences
All sequences(36) RefSeq(8) UniProt(2)
Polymorphisms
PCR(1) : SNPs within 2kb(157 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
InterPro IPR008071 Cytochrome P450, E-class, group I, CYP2J-like
Protein Ontology PR:000006240 cytochrome P450 2J6
References
(Earliest) J:47555 Ma J, et al., Mapping of the CYP2J cytochrome P450 genes to human chromosome 1 and mouse chromosome 4. Genomics. 1998 Apr 1;49(1):152-5
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory