Cyp2j6
Gene Detail

Symbol Name ID

Cyp2j6 cytochrome P450, family 2, subfamily j, polypeptide 6 MGI:1270148

Feature Type

protein coding gene

Genetic Map

Chromosome 4

44.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr4:96516138-96553661 bp, - strand From VEGA annotation of GRCm38   37524 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:128043  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 4 cattle; 1 dog; 1 chicken

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2j6

Human homologs

Human Homolog		CYP2J2, cytochrome P450, family 2, subfamily J, polypeptide 2
NCBI Gene ID		1573
neXtProt AC		NX_P51589
Human Synonyms		CPJ2
Human Chr (Location)		1p31.3-p31.2; chr1:60358980-60392423 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(2) : Targeted(2)

Gene Ontology (GO) classifications

All GO classifications: (21 annotations)

Process	arachidonic acid metabolic process, epoxygenase P450 pathway, ...
Component	endoplasmic reticulum, intracellular membrane-bounded organelle, ...
Function	arachidonic acid 11,12-epoxygenase activity, arachidonic acid 14,15-epoxygenase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (179)    Tissues (103)    Images (48)
Theiler Stages: 22, 23

Assay Type	Results
RNA in situ	179

cDNA source data(25)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(28) cDNA(27) Primer pair(1)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000007867 (Evidence)
Ensembl Gene Model	ENSMUSG00000052914 (Evidence)
Entrez Gene	13110 (Evidence)
UniGene	98200
DFCI	TC1578534, TC1623536
DoTS	DT.101365095, DT.487800, DT.91415351
NIA Mouse Gene Index	U025277
EC	1.14.14.1
Consensus CDS Project	CCDS18369.1
International Mouse Knockout Project Status	Cyp2j6

Sequences

Length	Strain/Species
genomic	OTTMUSG00000007867	VEGA Gene Model | MGI Sequence Detail	37524	C57BL/6J
transcript	OTTMUST00000017897	VEGA | MGI Sequence Detail	3605	Not Applicable
polypeptide	OTTMUSP00000008224	VEGA | MGI Sequence Detail	501	Not Applicable

All sequences(30) RefSeq(2) UniProt(2)

Polymorphisms

PCR(1) : SNPs(136 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001128	Cytochrome P450
InterPro	IPR017972	Cytochrome P450, conserved site
InterPro	IPR002401	Cytochrome P450, E-class, group I
InterPro	IPR008071	Cytochrome P450, E-class, group I, CYP2J-like
Protein Ontology	PR:000006240	cytochrome P450 2J6

References

(Earliest) J:47555 Ma J, et al., Mapping of the CYP2J cytochrome P450 genes to human chromosome 1 and mouse chromosome 4. Genomics. 1998 Apr 1;49(1):152-5
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(33)