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Rad51d
Gene Detail
 Symbol
Name
ID
Rad51d
RAD51 homolog D
MGI:1261809
Synonyms R51H3, Rad51l3
Feature Type protein coding gene
Genetic Map
Chromosome 11
50.30 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)
Sequence Map
Chr11:82876434-82890614 bp, - strand
From VEGA annotation of GRCm38

  14181 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:2156  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: DNA repair and recombination protein, Rad51 type
Gene Tree: Rad51d

Human
homologs
Human Homolog RAD51D, RAD51 paralog D
NCBI Gene ID 5892
neXtProt AC  NX_O75771
Human Synonyms  BROVCA4, R51H3, RAD51L3, TRAD
Human Chr (Location)  17q11; chr17:35099792-35119869 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RAD51D
Alleles
and
phenotypes
All alleles(14) : Gene trapped(11) Targeted(3)
Incidental mutations (data from APF )
 
Mice homozygous for disruptions in this gene die as embryos before E11.5.
 
Phenotype Images(1)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process ATP catabolic process, cellular response to DNA damage stimulus, ...
Component centrosome, chromosome, ...
Function ATP binding, DNA binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (17)    Tissues (12)   
Theiler Stages: 17, 22, 28
Assay TypeResults
RT-PCR 17
cDNA source data(16)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(19) cDNA(16) Primer pair(3)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000000932 (Evidence)
Ensembl Gene ModelENSMUSG00000018841 (Evidence)
Entrez Gene19364 (Evidence)
DFCITC1579830, TC1594125, TC1595335, TC1595596, TC1596481, TC1596616, TC1599134, TC1602378, TC1617479
DoTSDT.101355242, DT.101373766, DT.110543344, DT.482240, DT.488670, DT.91339421, DT.91339422, DT.91402292, DT.97367073
NIA Mouse Gene IndexU033179, U058096
Consensus CDS ProjectCCDS36250.1, CCDS70267.1, CCDS70268.1
International Mouse Knockout Project StatusRad51d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000932 VEGA Gene Model | MGI Sequence Detail 14181 C57BL/6J ±  kb
transcript OTTMUST00000001822 VEGA | MGI Sequence Detail 3426 Not Applicable 
polypeptide OTTMUSP00000000877 VEGA | MGI Sequence Detail 329 Not Applicable 

For the selected sequences
All sequences(106) RefSeq(16) UniProt(13)
Polymorphisms All PCR and RFLP(2) : PCR(1) RFLP(1) SNPs within 2kb(158 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR003593 AAA+ ATPase domain
InterPro IPR014774 Circadian clock protein KaiC/DNA repair protein RadA
InterPro IPR013632 DNA recombination and repair protein Rad51, C-terminal
InterPro IPR016467 DNA recombination and repair protein, RecA-like
InterPro IPR020588 DNA recombination/repair protein RecA/RadB, ATP-binding domain
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
Protein Ontology PR:000013677 DNA repair protein RAD51 homolog 4
References (Earliest) J:47042 Cartwright R, et al., Isolation of novel human and mouse genes of the recA/RAD51 recombination-repair gene family. Nucleic Acids Res. 1998 Apr 1;26(7):1653-9
(Latest) J:175085 Le Masson F, et al., Identification of Heat Shock Factor 1 Molecular and Cellular Targets during Embryonic and Adult Female Meiosis. Mol Cell Biol. 2011 Aug;31(16):3410-23
All references(41)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory