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Atp5c1 Gene Detail
Summary
  • Symbol
    Atp5c1
  • Name
    ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
  • Synonyms
    1700094F02Rik, F1 gamma
  • Feature Type
    protein coding gene
  • IDs
    MGI:1261437
    NCBI Gene: 11949
  • Gene Overview
    MyGene.info: ATP5C1
Location & Maps
more
  • Sequence Map
    Chr2:10056016-10080510 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24495 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 6.86 cM, cytoband A1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ATP5C1, ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATP5C1, ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATP5C, ATP5CL1
  • Links
    NCBI Gene ID: 509
    neXtProt AC: NX_P36542

  • Chr Location
    10p14; chr10:7788130-7807801 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    27
  • Gene trapped
    25
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011013 VEGA Gene Model | MGI Sequence Detail 24495 C57BL/6J ±  kb
transcript OTTMUST00000026255 VEGA | MGI Sequence Detail 1166 Not Applicable  
polypeptide OTTMUSP00000018960 VEGA | MGI Sequence Detail 298 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    143 from dbSNP Build 142
Protein
Information
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  • UniProt
    10 Sequences
  • Protein Ontology
    PR:000004455 ATP synthase subunit gamma, mitochondrial
  • InterPro Domains
    IPR000131 ATP synthase, F1 complex, gamma subunit
    IPR023632 ATP synthase, F1 complex, gamma subunit conserved site
Molecular
Reagents
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  • All nucleic 451
    Genomic 1
    cDNA 450

    Microarray probesets 5
Other
Accession IDs
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MGI:1923973
References
more
  • Summaries
    All 44
    Developmental Gene Expression 4
    Gene Ontology 8
    Phenotypes 8
  • Earliest
    J:46849 Ichida M, et al., MyoD is indispensable for muscle-specific alternative splicing in mouse mitochondrial ATP synthase gamma-subunit pre-mRNA. J Biol Chem. 1998 Apr 3;273(14):8492-501
  • Latest
    J:195548 Brody MJ, et al., Ablation of the cardiac-specific gene leucine-rich repeat containing 10 (Lrrc10) results in dilated cardiomyopathy. PLoS One. 2012;7(12):e51621

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory