Rrp1
Gene Detail

Symbol Name ID

Rrp1 ribosomal RNA processing 1 homolog (S. cerevisiae) MGI:1203500

Synonyms

Nnp1, NNP-1

Feature Type

protein coding gene

Genetic Map

Chromosome 10

39.72 cM
Detailed Genetic Map ± 1 cM


Mapping data(5)

Sequence Map

Chr10:78400362-78413043 bp, - strand From NCBI annotation of GRCm38   12682 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:90906  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Rrp1

Human homologs

Human Homolog		RRP1, ribosomal RNA processing 1 homolog (S. cerevisiae)
NCBI Gene ID		8568
neXtProt AC		NX_P56182
Human Synonyms		D21S2056E, NNP-1, NOP52, RRP1A
Human Chr (Location)		21q22.3; chr21:45209418-45223983 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(2) : Targeted(2)

Gene Ontology (GO) classifications

All GO classifications: (5 annotations)

Process	rRNA processing
Component	nucleolus, nucleus, ...

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (68)    Tissues (66)    Images (2)
Theiler Stages: 2, 13, 15, 16, 17, 20, 22, 23, 26, 28

Assay Type	Results
RNA in situ	48
Northern blot	4
RT-PCR	16

cDNA source data(215)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(225) Genomic(9) cDNA(215) Primer pair(1)
Microarray probesets(6)

Other database links

Ensembl Gene Model	ENSMUSG00000061032 (Evidence)
Entrez Gene	18114 (Evidence)
UniGene	38344
DFCI	TC1573166, TC1633757, TC1683664
DoTS	DT.101340274, DT.101390926, DT.110621466, DT.535485, DT.94403623, DT.94403689
NIA Mouse Gene Index	U031972
Consensus CDS Project	CCDS35961.1
International Mouse Knockout Project Status	Rrp1

Sequences

Length	Strain/Species
genomic	18114	NCBI Gene Model | MGI Sequence Detail	12682	C57BL/6J
transcript	NM_010925	RefSeq | MGI Sequence Detail	2008	C57BL/6
polypeptide	P56183	UniProt | EBI | MGI Sequence Detail	494	Not Applicable

All sequences(41) RefSeq(2) UniProt(3)

Polymorphisms

SNPs(48 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR010301	Nucleolar, Nop52
Protein Ontology	PR:000014309	ribosomal RNA processing protein 1 A

Graphical View of Protein Domain Structure

References

(Earliest) J:41225 Jansen E, et al., The NNP-1 gene (D21S2056E), which encodes a novel nuclear protein, maps in close proximity to the cystatin B gene within the EPM1 and APECED critical region on 21q22.3. Genomics. 1997 Jun 1;42(2):336-41
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)

Other accession IDs

MGI:2143715, MGI:2143716, MGI:2143730