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Tex9 Gene Detail
Summary
  • Symbol
    Tex9
  • Name
    testis expressed gene 9
  • Synonyms
    tsec-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1201610
    NCBI Gene: 21778
Location & Maps
more
  • Sequence Map
    Chr9:72450394-72492212 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      41819 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 40.08 cM, cytoband D
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    TEX9, testis expressed 9
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TEX9, testis expressed 9
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 374618
    neXtProt AC: NX_Q8N6V9

  • Chr Location
    15q21.3; chr15:56244085-56459738 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 32072
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: TEX9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Gene trapped
    7
  • Targeted
    2
  • Genomic Mutations
    1 involving Tex9
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044783 VEGA Gene Model | MGI Sequence Detail 41819 C57BL/6J ±  kb
transcript OTTMUST00000117698 VEGA | MGI Sequence Detail 2794 Not Applicable  
polypeptide OTTMUSP00000065772 VEGA | MGI Sequence Detail 387 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    400 from dbSNP Build 142
Protein
Information
less
  • UniProt
    12 Sequences
  • Protein Ontology
    PR:000016260 testis-expressed sequence 9 protein
Molecular
Reagents
less
  • All nucleic 53
    cDNA 50
    Primer pair 3

    Microarray probesets 5
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Phenotypes 7
  • Earliest
    J:44351 Chen L, et al., Molecular cloning and analysis of novel cDNAs specifically expressed in adult mouse testes. Biochem Biophys Res Commun. 1997 Nov 17;240(2):261-8
  • Latest
    J:141291 Tamplin OJ, et al., Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. BMC Genomics. 2008;9(1):511

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory