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Tex9 Gene Detail
Summary
  • Symbol
    Tex9
  • Name
    testis expressed gene 9
  • Synonyms
    tsec-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1201610
    NCBI Gene: 21778
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:72458055-72492686 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 40.08 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    324 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1201610
protein coding gene Chr9:72450394-72492686 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035015
protein coding gene Chr9:72613138-72657648 (-)
A/J MGP_AJ_G0034996
protein coding gene Chr9:70084482-70126548 (-)
AKR/J MGP_AKRJ_G0034925
protein coding gene Chr9:71753307-71799362 (-)
BALB/cJ MGP_BALBcJ_G0034988
protein coding gene Chr9:69792211-69834504 (-)
C3H/HeJ MGP_C3HHeJ_G0034697
protein coding gene Chr9:72256458-72302645 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035507
protein coding gene Chr9:74512954-74556677 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032418
protein coding gene Chr9:69572443-69620150 (-)
CAST/EiJ MGP_CASTEiJ_G0034019
protein coding gene Chr9:72566075-72612929 (-)
CBA/J MGP_CBAJ_G0034670
protein coding gene Chr9:77112445-77160757 (-)
DBA/2J MGP_DBA2J_G0034829
protein coding gene Chr9:69802853-69844805 (-)
FVB/NJ MGP_FVBNJ_G0034771
protein coding gene Chr9:69114495-69159149 (-)
LP/J MGP_LPJ_G0034910
protein coding gene Chr9:72817025-72859148 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034812
protein coding gene Chr9:78186912-78232292 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035529
protein coding gene Chr9:71898271-71940748 (-)
PWK/PhJ MGP_PWKPhJ_G0033723
protein coding gene Chr9:70059590-70112283 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033556
protein coding gene Chr9:72209178-72250294 (-)
WSB/EiJ MGP_WSBEiJ_G0034131
protein coding gene Chr9:71829088-71877367 (-)



Homology
more
  • Human Ortholog
    TEX9, testis expressed 9
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TEX9, testis expressed 9
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 374618
    neXtProt AC: NX_Q8N6V9
    UniProt: Q8N6V9

  • Chr Location
    15q21.3; chr15:56243971-56445997 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 32072
    1 human;1 mouse;1 rat;1 chimpanzee;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: TEX9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 21778 NCBI Gene Model | MGI Sequence Detail 34632 C57BL/6J ±  kb
transcript NM_009359 RefSeq | MGI Sequence Detail 4317 C57BL/6  
polypeptide Q9D845 UniProt | EBI | MGI Sequence Detail 387 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 54
    cDNA 51
    Primer pair 3

    Microarray probesets 5
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Phenotypes 7
  • Earliest
    J:44351 Chen L, et al., Molecular cloning and analysis of novel cDNAs specifically expressed in adult mouse testes. Biochem Biophys Res Commun. 1997 Nov 17;240(2):261-8
  • Latest
    J:141291 Tamplin OJ, et al., Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives. BMC Genomics. 2008;9(1):511

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory